Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2105 |
Symbol | |
ID | 6375799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2277458 |
End bp | 2278372 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642684596 |
Product | 6-phosphogluconate dehydrogenase-like protein |
Protein accession | YP_001960495 |
Protein GI | 189501025 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.434291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.401294 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTTG GATTTATCGG TCTCGGGAAA ATGGGAGCGA ACATGGTTGA AAATCTTCTT GACCATGAGC ATGAGGTTGT TGTTTACGAT CTTTCCAGAG AGCAGGTCGA CAGGTTGGCC GGCAGGGGGG CTGAGCCTTC AAATTCTCTC GATGAGTTGG TCGCCGGGCT GAGTCACCCA AGGATCATCT GGCTTATGGT TCCATCGGGC GCTCCTGTTG ACGCAACCCT GGATAGTCTT GTCATCTCGC TTGAACCGGG TGATATTGTG ATAGACGGAG GTAATTCAAA TTTTCATGAT ACCGTGAGAA GAGGGGGGGC TCTTGCTGAA AAGGGAATAC ATTTCATGGA CGTCGGAACA AGCGGCGGTC TGGAAGGAGC GAGAAGCGGA GCATGCATGA TGATCGGGGG AAACCCTGAG GTCTATGCAT CCCTTGAACC TGTGTTCAAG GATCTTTGTG TTTCCGGTGG TTATGGTTAT ATGGGGGGGG CCGGTGCGGG TCATTTCACG AAAATGGTGC ACAATGGCGT TGAATACGGT ATGATGCAGG CGATAGGTGA AGGATTCGAT ATTCTTGAAA ACAGTGAGTA TTCGTTCGAT CACCATGAAG TTGCAAGGGT ATGGGCTAAC GGTTCGGTAA TACGAGGGTG GCTGATGGAT CTTGTTGCAA GGGCATTTGA ACGTGATGGT CATCTGAATT ATCTGTCCGG GATAATTGCC GATTCCGGAG AAGGTAAATG GACAGTTGAG ACCGCCCTTG ACGAGGGAGT TTCCATACCG GTTATTGCAG GCGCTCTTTT CAGGCGTTAC CGTTCACGAT CGCAGGAAAA TTTTTCGGAC AAGGTTGTCG CCGCCCTGCG CGATGAATTC GGCGGTCACG GGTATACTCA AAAATCCAGG TTACAGAAGA AATGA
|
Protein sequence | MKLGFIGLGK MGANMVENLL DHEHEVVVYD LSREQVDRLA GRGAEPSNSL DELVAGLSHP RIIWLMVPSG APVDATLDSL VISLEPGDIV IDGGNSNFHD TVRRGGALAE KGIHFMDVGT SGGLEGARSG ACMMIGGNPE VYASLEPVFK DLCVSGGYGY MGGAGAGHFT KMVHNGVEYG MMQAIGEGFD ILENSEYSFD HHEVARVWAN GSVIRGWLMD LVARAFERDG HLNYLSGIIA DSGEGKWTVE TALDEGVSIP VIAGALFRRY RSRSQENFSD KVVAALRDEF GGHGYTQKSR LQKK
|
| |