Gene Cphamn1_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2105 
Symbol 
ID6375799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2277458 
End bp2278372 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content50% 
IMG OID642684596 
Product6-phosphogluconate dehydrogenase-like protein 
Protein accessionYP_001960495 
Protein GI189501025 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating)
[TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.434291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.401294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG GATTTATCGG TCTCGGGAAA ATGGGAGCGA ACATGGTTGA AAATCTTCTT 
GACCATGAGC ATGAGGTTGT TGTTTACGAT CTTTCCAGAG AGCAGGTCGA CAGGTTGGCC
GGCAGGGGGG CTGAGCCTTC AAATTCTCTC GATGAGTTGG TCGCCGGGCT GAGTCACCCA
AGGATCATCT GGCTTATGGT TCCATCGGGC GCTCCTGTTG ACGCAACCCT GGATAGTCTT
GTCATCTCGC TTGAACCGGG TGATATTGTG ATAGACGGAG GTAATTCAAA TTTTCATGAT
ACCGTGAGAA GAGGGGGGGC TCTTGCTGAA AAGGGAATAC ATTTCATGGA CGTCGGAACA
AGCGGCGGTC TGGAAGGAGC GAGAAGCGGA GCATGCATGA TGATCGGGGG AAACCCTGAG
GTCTATGCAT CCCTTGAACC TGTGTTCAAG GATCTTTGTG TTTCCGGTGG TTATGGTTAT
ATGGGGGGGG CCGGTGCGGG TCATTTCACG AAAATGGTGC ACAATGGCGT TGAATACGGT
ATGATGCAGG CGATAGGTGA AGGATTCGAT ATTCTTGAAA ACAGTGAGTA TTCGTTCGAT
CACCATGAAG TTGCAAGGGT ATGGGCTAAC GGTTCGGTAA TACGAGGGTG GCTGATGGAT
CTTGTTGCAA GGGCATTTGA ACGTGATGGT CATCTGAATT ATCTGTCCGG GATAATTGCC
GATTCCGGAG AAGGTAAATG GACAGTTGAG ACCGCCCTTG ACGAGGGAGT TTCCATACCG
GTTATTGCAG GCGCTCTTTT CAGGCGTTAC CGTTCACGAT CGCAGGAAAA TTTTTCGGAC
AAGGTTGTCG CCGCCCTGCG CGATGAATTC GGCGGTCACG GGTATACTCA AAAATCCAGG
TTACAGAAGA AATGA
 
Protein sequence
MKLGFIGLGK MGANMVENLL DHEHEVVVYD LSREQVDRLA GRGAEPSNSL DELVAGLSHP 
RIIWLMVPSG APVDATLDSL VISLEPGDIV IDGGNSNFHD TVRRGGALAE KGIHFMDVGT
SGGLEGARSG ACMMIGGNPE VYASLEPVFK DLCVSGGYGY MGGAGAGHFT KMVHNGVEYG
MMQAIGEGFD ILENSEYSFD HHEVARVWAN GSVIRGWLMD LVARAFERDG HLNYLSGIIA
DSGEGKWTVE TALDEGVSIP VIAGALFRRY RSRSQENFSD KVVAALRDEF GGHGYTQKSR
LQKK