| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2102 |
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| Symbol | |
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| ID | 6375796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 2273180 |
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| End bp | 2275186 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642684593 |
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| Product | transketolase |
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| Protein accession | YP_001960492 |
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| Protein GI | 189501022 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000131444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.204144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACAG ACCCAATCGA TCAGCTGGCG ATCAATACCG TCCGCATGTT AGCTGTTGAC
ATGGTGGAAA AAGCGCGGTC AGGACATCCG GGAATGCCTA TGGGAGCGGC TCCCATGGCA
TATGTGCTCT GGACAAAGAT CATGAAGCAC AATCCCGACA ATCCTGAATG GATCAACCGG
GACCGATTCG TACTGTCCGC TGGCCACGGC TCGGCGCTTC TGTATTCACT GCTGCACCTT
ACAGGTTACG ACCTCTCCAT GGATGACCTC AGACAGTTTC GCCAGTGGGG AAGCAAAACC
CCCGGGCATC CTGAATACGG CCACACTCCC GGCGTCGAGA CGACAACAGG CCCTCTTGGC
CAGGGCCTTT CCAACGCTGT CGGAATGGCA ATTGCCGAGC GATACTGCGC TACGCGTCTC
AATAAACCCG ACATGGAACT GATCGACTAC TCTACCTACG TCATATGCGG TGACGGAGAC
CTGATGGAAG GCATTACCTC CGAGGCGGCA TCCATTGCCG GACATCTCCG CCTGGGCAAG
CTGATCTGCA TGTATGATCA CAACCGCATA TCCATTGAAG GGTCGACCGA CCTTGCCTTT
ACAGAAAGCG TGCACCAGAG GTTCGAAGCA TATGGATGGC ATGTGGTGGA AATCGACGGC
AACGACCCTG AAGCTATCGA GGAAGCGTTA CATGCCGCCC GTCAGGTAAC CGGGAAACCC
TCGATGATTA TCGCCAAAAC CAACATAGGC TTCGGGAGCC CTAACAAGCA GGACAGTGCC
TCGTCGCACG GCGCCCCTCT TGGAGCTGAA GAGGTCGCGC TGGTAAGAAA ATATTTCGGA
TTCCCTGAAG AGAGCTCCTT CTTTGTCCCT GAATCGGTAG CCGCCCACAT GAGCGCCGTG
TGTGAAAAAG GGAGCCGTTC TGAAACAACA TGGAATGAAC TGTTCAACAC ATACGGTAAA
AGCCATCCCG AACTCGCTGA GGAAATGGAA ACCATGCTCC GCAACGAGCT GCCTGAAGGA
TGGGAAACAT TACTTCCTCA ATTCAGCCCT GAAGAAAAAC TTGCAACCCG TCAGGCATCT
TCCAGGGTAC TGCATGCGCT GGTAGGAAAA ATCCCGTTTT TGGTGGGTGG TTCAGCCGAC
CTCGCACCAT CAACCGGTAC AGAAGTCAAA CATGCTACCG ATTTCACCTC TGAAAATTAT
GGCGGAGCTA TTTTTCGATT CGGCGTCAGG GAACATGCCA TGGGCGCCAT TATCAACGGC
ATGGCCCTCT CCCGTATTCT CATTCCCTAC GGAGCGACCT TCCTTGTTTT CGCGGATTAT
ATGAAACCCG CTCTTCGCCT CGCAGCTATC ATGCAGGTCC CGTCTATTTT CATATTCACT
CATGACAGTA TAGCTGTCGG GGAAGACGGT CCGACACATC AGCCGATCGA ACAGCTGGCC
ATGATGCGTT CAATACCGGG CCTGACCGTT ATCCGCCCGG CAGATGCGCA GGAGACAAAA
GCGGCTTGGT ACATCGCCCT GACGCAGAAC AAACCTACGG TGCTTGTCTT TTCAAGACAG
ACACTCCCGG TACTCGACCA GGAGAAATAC CCTGTCGTGA AAGGAACCCC CAAAGGAGCC
TACATACTTT CCGAATGGAG CGCCCCGTCG ACAGATGGCA ACAGACCGGT AATACTTATC
GCGACAGGCG CTGAAGTTCA CCTTGCCCTT GAAGCACAGA GCGCTCTTCT CAACGCGGGC
GTTCCGGCCA GAGTTGTTTC CATGCCTTCT CGAGAACTGT TCGAACAGCA GCCCGAGTCT
TACCGAAACG AGGTTTTGCC GCCTTCAATA CGACGGAGAA TCGTCATTGA AGCCGCGTCT
CCTTTCGGAT GGGACAAGTA CGCAACAGAT GAAGGGAGCA TTCTGGGCAT AAACCGTTTC
GGAACGTCCG CCCCGGGAAA CACGGTATTG CGTGAATACG GTTTCAGCGC CGCCGCTATT
GTCGAAGCCG CGAAAAACCT GCAATAG
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| Protein sequence | MHTDPIDQLA INTVRMLAVD MVEKARSGHP GMPMGAAPMA YVLWTKIMKH NPDNPEWINR
DRFVLSAGHG SALLYSLLHL TGYDLSMDDL RQFRQWGSKT PGHPEYGHTP GVETTTGPLG
QGLSNAVGMA IAERYCATRL NKPDMELIDY STYVICGDGD LMEGITSEAA SIAGHLRLGK
LICMYDHNRI SIEGSTDLAF TESVHQRFEA YGWHVVEIDG NDPEAIEEAL HAARQVTGKP
SMIIAKTNIG FGSPNKQDSA SSHGAPLGAE EVALVRKYFG FPEESSFFVP ESVAAHMSAV
CEKGSRSETT WNELFNTYGK SHPELAEEME TMLRNELPEG WETLLPQFSP EEKLATRQAS
SRVLHALVGK IPFLVGGSAD LAPSTGTEVK HATDFTSENY GGAIFRFGVR EHAMGAIING
MALSRILIPY GATFLVFADY MKPALRLAAI MQVPSIFIFT HDSIAVGEDG PTHQPIEQLA
MMRSIPGLTV IRPADAQETK AAWYIALTQN KPTVLVFSRQ TLPVLDQEKY PVVKGTPKGA
YILSEWSAPS TDGNRPVILI ATGAEVHLAL EAQSALLNAG VPARVVSMPS RELFEQQPES
YRNEVLPPSI RRRIVIEAAS PFGWDKYATD EGSILGINRF GTSAPGNTVL REYGFSAAAI
VEAAKNLQ
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