| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2093 |
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| Symbol | metH |
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| ID | 6375787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 2261476 |
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| End bp | 2265159 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642684584 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_001960483 |
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| Protein GI | 189501013 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.883808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAAT CGCTGGCAAG CTTACTTGAA AAAAGAATAC TTGTACTGGA TGGCGCTATG
GGCACCTTGA TCCAGACATA CAAACTCGAA GAAAACGATT ACAGGGGAGA ACGATTTGCC
TCACACGGTC ATTCCCTGAA AGGCAATAAT GACATCCTCG TTTTAACGCA GCCTGATATC
ATTCATGCGA TACATTGCGA ATTCCTCGAA GCAGGCTCCG ATATTATCGA AACCAACACC
TTCAACGCCA ATCCGGTCTC CCAGTCCGAT TACGGTACTG AAAACCTTGT AAAACACATC
AACCTCGAAG CCGCGCGTCT CGCACGGAAG GCAGCAGATG CCTATAGCCT GAAAGATCCG
TCAAAACCCC GTTTCGTCGC AGGCTCGATA GGCCCCACAA ACAAAACACT CTCGCTCTCC
CCTGATGTCA ATAACCCGGG ATATCGGGCG GTATCGTTCA AGGAAATGGC AGACAACTAC
CGCGAACAGC TTGAAGGCCT GATCGAGGGC GGCGTTGATC TTCTGCTTGT TGAAACGGTG
TTCGATACGC TGAACTGCAA AGCCGCGATT TTGGCCATTG AAGAGATATC GAGAGAAAAA
GGGGTACGGC TGCCGATCAT GATATCGGGC ACTATAGTCG ATGCGAGCGG GCGGACACTT
TCCGGCCAGA CGACCGAAGC GTTCTGGATT TCAGTAGCAC ACACGCCCGG CCTGCTGAGT
GTCGGGCTCA ACTGTGCTCT TGGCGCAAAG CAGATGAGAC CCTTTCTCGA AGCACTCTCT
CATGTCGCAG GAAGTCTGGT CAGTGTCTAC CCGAACGCCG GCCTGCCTAA TGAGTTCGGC
GAATACGACG ACAGCCCTGA ATATATGGCT TCACAGATCG CTGATTTCGC GCAGTCCGGT
TTTGTCAACA TTGTCGGAGG ATGCTGCGGC ACCAAGCCGG AACATATCAG GGCCATCGCT
GAAACGGTTG CAACGATCGA ACCGAGAAAA AAGCCGTCAA TGCCGACTGA GCTCAGGCTT
GCAGGGCTCG AACCGCTGAT TGTCAACAAA ACCACAGGCT TCATCAACAT CGGCGAACGC
ACAAACGTTA CCGGATCGAG AAAGTTCGCA CGACTCATCA GGGAGGAAAA ATACGATGAA
GCCCTCTCCA TAGCGCGCCA ACAGGTTGAA AACGGCGCGC AGGTGATCGA TATCAACGTT
GATGAAGGCA TGCTCGATTC CGAAAAAGTA ATGCGGGATT TCGTCAACAT GATCGGCTCT
GAACCTGAGA TCGCCAGAGT ACCGCTGATG ATCGATTCTT CGAAATGGTC GGTAATTGAA
AGCGGGCTTT GCTGCGTTCA GGGAAAATCC ATTGTCAACT CTATCAGTCT GAAAGAGGGT
GAAGATCTCT TCAGAGAGCG AGCCAAAAAG GTCATGATCT ATGGGGCCGC TGCTGTTGTC
ATGGCCTTTG ACGAAAAAGG ACAGGCCGAT TCGCTTGAAC GGCGTATCGA GATCTGCGAG
AGAGCCTACA GAATTCTTGT CGATGAGGTC GGTTTTCATC CTGAAAACAT CATTTTTGAC
CCGAACGTAC TGACGGTGGC AACCGGCATA GAAGAACATG ACAACTATGC GGTTGACTTC
ATCGAATCAG TGCGCTGGAT CAAGGAAAAC CTTCCGCATG CAAGGGTATC GGGAGGAATA
AGTAACGTCT CTTTTTCATT CAGGGGCAAC AACCCCGTTC GCGAAGCGAT GCATGCTGCG
TTTCTGTTCC ACGCCATCCA TGCGGGGCTC GATATGGGCA TTGTCAATGC CGGTCAGCTG
GCAGTCTATG ATGATATTGA GCCAGAGCTG CTTGAAAGGG TCGAGGATGT CCTGCTCAAC
CGTCGTAAAG ACGCGACTGA ACGCCTTGTC GAATTTGCAG AAACCATCAA GGATGACGGA
CAGAAAGCCG AAGCGAAACA GGCGGAATGG AGAAACGGTA CCGTTGAAGA ACGTCTGCAG
CACGCTCTTG TAAAAGGAAT CGTCGACTAT ATCGACAGTG ATACCGAAGA GGCACGCCAG
GCGTATGCAA GCCCTCTTGA TATTATCGAG GGACCGCTGA TGGGTGGTAT GAATGTCATA
GGTGACCTCT TCGCCGAAGG CAAAATGTTC CTGCCTCAGG TTGTCAAAAG CGCCAGGGTC
ATGAAAAAAG CCGTTGCCTG GCTCATCCCC TATATCGAAG AGGAAAAAGC GAAAAATAAA
GATACCAGAC CCGTGGCAAA GGTCCTTCTC GCGACGGTAA AAGGCGATGT ACACGATATC
GGCAAAAACA TCGTCTCGGT TGTCCTTGCC TGTAACAATT TCGAGGTTGT CGATATCGGT
GTCATGATGC CGTGCGAGAA CATTCTTGAA GCGGCTGAAA AAGAAAAAGC GGACATTATC
GGTCTCAGCG GCCTGATCAC TCCCTCACTT GACGAAATGG TGCATGTGGC AAAAGAGATG
GAGCGGAAAG GCATGCGCAT TCCCCTGCTC ATAGGAGGCG CAACGACATC CAGAGTCCAT
ACCGCAGTGA AAATCGCGCC GAACTATTCA GGACCGGTTG TCCAGGTACT TGACGCTTCA
AGGAGCGTCC CGGCCGTCAA CAGCCTGTTG ACCTCTTCCA TGAAGGGTGC TTTCGTAAAG
AAACTGACTG AAGAACAGCA TTCCCTGCGT GAAAGTCATG CGGCAAGACA AACCTCGAGG
CAGCACAGGA GCATCGGCGA GTCAAGAGAA AACCGGGCGA AACTCTCCTG GAGCCCTGAA
ACCGTTACCA TACCGAATCA TCCCGGCATT ACAGAACAGG CAAATGTTTC CCTTTCGGAA
CTCCGCGAGT ACATCGACTG GACGCCTTTC TTCAACGTAT GGGAGCTGCA TGGAAAATAT
CCTGATATCT TCGAGAATAA ACACTGTGGG AGCGAAGCAC GAAAACTGTT CGAAGATGCA
AACAGCCTGC TTGACAGGAT CTGTGAAGAA AAGTCTCTGG TGGCCAAAGG GGTTGCAGGC
ATCTTCCCTG CAAACAGCGT CGGTGACGAT ATAGAGATAT ATACCGACGA AAGCAGAGCT
ACGGTTCTGA CAACCCTGCA TACCCTCCGG CAGCAGCACG AGAAGAATAC AGGCAGTGCA
AATCTCGCTC TTGCTGACTT CATCGCGCCA AAATCAAGCG GAAGAGATGA CTATATCGGA
GCATTCACTC TCACGGCCGG TCACGGGGTG AAAGAGTTGA TGAAACGCTT TGAAGCGGAA
CACGATGATT ATCACCGTAT TATGGTGCAG GCCCTGGCTG ACAGGCTTGC TGAAGCTTTT
GCCGAGATGC TGCATCAGCG GGTTCGCAAG GAACTCTGGG GATATGCCAT CGACGAAAAC
CTGACAAAAA AGCAGCTGCT CAATGAAAAG TACAGAGGGA TCCGACCGGC TCCCGGCTAT
CCGGCATGCC CTGATCATAC TGAAAAGCCC CTGATTTTCA ACCTGCTTAA CAGCGAAGCC
ATTACCGGGG TAACACTGAC GGAAACCTAT GCCATGAACC CGCCGGCGTC GGTCTGCGGG
CTTTACTTCG CACATCCTGA AGCGAAATAT TTCGTTCTGG GATCGATAGG AAAAGACCAG
GTTGAAGAGT ATGCTCTCCG TAAAGGGATG AGCATGGCTG AAGCGGAAAA GTGGCTGGCA
CCCAACCTCA ACTATACACC GTAG
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| Protein sequence | MKESLASLLE KRILVLDGAM GTLIQTYKLE ENDYRGERFA SHGHSLKGNN DILVLTQPDI
IHAIHCEFLE AGSDIIETNT FNANPVSQSD YGTENLVKHI NLEAARLARK AADAYSLKDP
SKPRFVAGSI GPTNKTLSLS PDVNNPGYRA VSFKEMADNY REQLEGLIEG GVDLLLVETV
FDTLNCKAAI LAIEEISREK GVRLPIMISG TIVDASGRTL SGQTTEAFWI SVAHTPGLLS
VGLNCALGAK QMRPFLEALS HVAGSLVSVY PNAGLPNEFG EYDDSPEYMA SQIADFAQSG
FVNIVGGCCG TKPEHIRAIA ETVATIEPRK KPSMPTELRL AGLEPLIVNK TTGFINIGER
TNVTGSRKFA RLIREEKYDE ALSIARQQVE NGAQVIDINV DEGMLDSEKV MRDFVNMIGS
EPEIARVPLM IDSSKWSVIE SGLCCVQGKS IVNSISLKEG EDLFRERAKK VMIYGAAAVV
MAFDEKGQAD SLERRIEICE RAYRILVDEV GFHPENIIFD PNVLTVATGI EEHDNYAVDF
IESVRWIKEN LPHARVSGGI SNVSFSFRGN NPVREAMHAA FLFHAIHAGL DMGIVNAGQL
AVYDDIEPEL LERVEDVLLN RRKDATERLV EFAETIKDDG QKAEAKQAEW RNGTVEERLQ
HALVKGIVDY IDSDTEEARQ AYASPLDIIE GPLMGGMNVI GDLFAEGKMF LPQVVKSARV
MKKAVAWLIP YIEEEKAKNK DTRPVAKVLL ATVKGDVHDI GKNIVSVVLA CNNFEVVDIG
VMMPCENILE AAEKEKADII GLSGLITPSL DEMVHVAKEM ERKGMRIPLL IGGATTSRVH
TAVKIAPNYS GPVVQVLDAS RSVPAVNSLL TSSMKGAFVK KLTEEQHSLR ESHAARQTSR
QHRSIGESRE NRAKLSWSPE TVTIPNHPGI TEQANVSLSE LREYIDWTPF FNVWELHGKY
PDIFENKHCG SEARKLFEDA NSLLDRICEE KSLVAKGVAG IFPANSVGDD IEIYTDESRA
TVLTTLHTLR QQHEKNTGSA NLALADFIAP KSSGRDDYIG AFTLTAGHGV KELMKRFEAE
HDDYHRIMVQ ALADRLAEAF AEMLHQRVRK ELWGYAIDEN LTKKQLLNEK YRGIRPAPGY
PACPDHTEKP LIFNLLNSEA ITGVTLTETY AMNPPASVCG LYFAHPEAKY FVLGSIGKDQ
VEEYALRKGM SMAEAEKWLA PNLNYTP
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