Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2090 |
Symbol | |
ID | 6375784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 2257529 |
End bp | 2259202 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642684581 |
Product | Electron-transferring-flavoprotein dehydrogenase |
Protein accession | YP_001960480 |
Protein GI | 189501010 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) [COG2440] Ferredoxin-like protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.522726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCAAGCTG AAAGAGAATC ACTCGACTTT GATATTGTGT TCGTGGGCGC CGGACCGGCA AACCTCACTG CGGCCATTGA CCTGCAACGC CTGATTAACC GGCATAATGC ATCGGCGACA ACAATCCTCG AACCTGAAAT TGCGATACTC GAGAAAGGCC GGTACGTGGG AGCTCACCTT CTTTCCGGCG CAATTCTCGA TCCTGCCGTA TTCAATCAGT TCATGCCCGA TTTCCTCCAA AGAGGATGCC CGCTCGAAGC CGAAGTCACC CGGGATTCGG CCTGGTTTCT CTTCGGACAG AAAAAAATCC AGATACCCTA TCTTCCCGAA CCGTTCCGCA ACAGGGGCAA CAGACTTGTC TCTCTGAGTA AACTCGGAGC ATGGCTGGCA GGAGAAGCTG AATCGCTGGG CATCAACATA TTCGACAACA CCGCCGCGGT TGAACCGGTC ATCGAAAACG GCCGCGTAAC AGGGGTCATA ACGGACGACA AGGGAATCGA CAAAGCGGGA AACGCCAAAT CAGGAGCGGA ACCAGGAATG CGGCTCAACG CGAAAACTGT CGTGGTGGGT GAAGGTTCTC ACGGCTCGAT TTTCCGCAAG CTCGATCGTG CGTTCGCTCT TTCGGAAGAG AGCCGGAAGC AGATCTATGA AACCGGTGTC AAGGAGTTTT GGAAAATACC TGAAGGCAGA ATCGAGGCCG GTGAGGTCCG GCACACGTTC GGCTATCCGC TGCCTTCATC GATATACGGA GGAGGCTGGC TCTATGCGTT CTCTGATACG GAGGTATCCC TCGGGTTTGT CACTTCAGCT GAACCGGAGC GGCCGGAAGT GGATTCCCAC TACAATCTGC AGCTGTTCAA ACAACATCCG TTCATTAGCT CCATCATCCG GGACGGACAA CTGATGGAGT TTGGCGCCAA GACCATTACA TCAGGAGGTT TCCATGCTAT GCCGAAGCCT TCAGGGCCCG GATTTCTGCT TACCGGAGAA ACCGCCGGTC TGGTAAACAT GCAGCGTCTG AAAGGCCTTC ACCTGGCAAT GCAGTCAGGG ATTATGGCAG CAGAGACACT CTTTGCCTCT CTGCTGACGG ATGACTTTTC AGAGAAAGCG CTCCATTCCT ATCGCGAACG CCTTGAAAAT TCCGAAGCAT ACAAAGAGAT GCATATGGCG GGAAATTACC GGCAGGCATT TGAAAACGGT CTCTATACAG GACTCATGCA GGCAGGTCTT TCTTTGAAAA TACCCGGCCT CCTGCCCTCG GAAAAAGCCG CAGCTTCAGC AGAAAACAAA CCGGATACCG GCAAAAAGCA CTACTTGAAG TGGATACAGA AAAAAGCCGC ATTCAGGCCT GACGACGCAT TGACCTTCTC AAAAAGCACC GACCTCTATG CCTCAGGAAC GGTACATGAA GAAGACCAAC CCTGCCATCT GCTGATAACA ACAGAGGACA TAACCGATAT CTGCCTGAAA AAATGTACTG AAGCGTTCGG TAACCCCTGC CAGCATTTCT GCCCGGCAGG AGTCTACGAA ATCAATCATG ACGCCGATCC GTTTCTCAGA CTGTCGCCTT CGAACTGCCT GCACTGTAAA ACCTGTGAAA TCATCGATCC GTATGGCAGT ATTACCTGGG TGCCTCCGGA GGGCGGCGGC GGCCCCGGTT ACAGATCAAG CTGA
|
Protein sequence | MQAERESLDF DIVFVGAGPA NLTAAIDLQR LINRHNASAT TILEPEIAIL EKGRYVGAHL LSGAILDPAV FNQFMPDFLQ RGCPLEAEVT RDSAWFLFGQ KKIQIPYLPE PFRNRGNRLV SLSKLGAWLA GEAESLGINI FDNTAAVEPV IENGRVTGVI TDDKGIDKAG NAKSGAEPGM RLNAKTVVVG EGSHGSIFRK LDRAFALSEE SRKQIYETGV KEFWKIPEGR IEAGEVRHTF GYPLPSSIYG GGWLYAFSDT EVSLGFVTSA EPERPEVDSH YNLQLFKQHP FISSIIRDGQ LMEFGAKTIT SGGFHAMPKP SGPGFLLTGE TAGLVNMQRL KGLHLAMQSG IMAAETLFAS LLTDDFSEKA LHSYRERLEN SEAYKEMHMA GNYRQAFENG LYTGLMQAGL SLKIPGLLPS EKAAASAENK PDTGKKHYLK WIQKKAAFRP DDALTFSKST DLYASGTVHE EDQPCHLLIT TEDITDICLK KCTEAFGNPC QHFCPAGVYE INHDADPFLR LSPSNCLHCK TCEIIDPYGS ITWVPPEGGG GPGYRSS
|
| |