| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2086 |
|---|
| Symbol | |
|---|
| ID | 6375780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2253521 |
|---|
| End bp | 2254399 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642684577 |
|---|
| Product | parB-like partition protein |
|---|
| Protein accession | YP_001960476 |
|---|
| Protein GI | 189501006 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAA AAGCTTTGGG AAAAGGTCTG AAAGCACTGA TCCCTGATGA AGGGTTTGTC
CCTCTGAATA AAACTGACAA CGATTCCCGG TCTCACGCGG GCTTTATAGG AAGTCTGCCT
GTTGAAAAAG TCAGGGTAAA CCCGTTTCAG CCGAGAAAAG ATTTCGATGA GAATGCGCTG
GAAGAACTGA AAAATTCTAT TCTCGAAAAT GGGGTTATAC AGCCGGTAAC CGTCAGCAGG
GATGGGGACG GGTATCAGCT GATAAGTGGT GAGCGGCGCC TGCGGGCGGT GCGAAAAGCT
GGCTTCAAGT TCATTCCGGG CTATATTATC GAAGCCGGTG AGGACGCGGG AAAGCTTGAA
ATGGCGTTGA TTGAAAATAT TCAGCGAGAG GACCTCAATG CCATCGAAAT CGCAATAGCC
TTAAAAAGTC TGGTTACCAC CTGTAATCTT ACCCAGGACG AGATCGCCCA GAAAGTCGGC
AAGAACCGCT CGACAATCAG CAATTTTTTA AGACTGTTAA AACTGCCTGC ATCGATCCAG
GAAAGTATCC GCCAGAAGAA GATATCCTCA GGACATGCCA GGGCGCTTAT CAATCTGCCA
AACCAGAAGC AGCAGGTGAA GGTCTGGAAA CTGATCATCC GTAACAAGTT ATCCGTTCGC
CAGACAGAGG ATCTTGTCAA CAGGATGTTC CGTGATGAAC CAAAACCGGC AATCAAGGAT
CGTGCGAGCG ATGACTTCAG CCATCTTGAG TCCCGTTTGA GGGATCGTTT TGCAACCAAA
GTCAGGATTG TTGAAAAAAA CAAGGGCAAA GGAGAAATTC ATATCCAGTA CTTTTCTCCG
GACGATCTCG AGCGGATTCT TGATATCATG CACTCCTGA
|
|---|
| Protein sequence | MTKKALGKGL KALIPDEGFV PLNKTDNDSR SHAGFIGSLP VEKVRVNPFQ PRKDFDENAL
EELKNSILEN GVIQPVTVSR DGDGYQLISG ERRLRAVRKA GFKFIPGYII EAGEDAGKLE
MALIENIQRE DLNAIEIAIA LKSLVTTCNL TQDEIAQKVG KNRSTISNFL RLLKLPASIQ
ESIRQKKISS GHARALINLP NQKQQVKVWK LIIRNKLSVR QTEDLVNRMF RDEPKPAIKD
RASDDFSHLE SRLRDRFATK VRIVEKNKGK GEIHIQYFSP DDLERILDIM HS
|
|---|
| |