| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2077 |
|---|
| Symbol | |
|---|
| ID | 6375771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 2243096 |
|---|
| End bp | 2243917 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642684568 |
|---|
| Product | naphthoate synthase |
|---|
| Protein accession | YP_001960467 |
|---|
| Protein GI | 189500997 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0447] Dihydroxynaphthoic acid synthase |
|---|
| TIGRFAM ID | [TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.310676 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACTG TAAACTGGAT ACAGTCCGGT GATTTCACCG ATATTTTCTA CCATAAAGCT
GATGGCATAG CCAAAATAAC CATCAATCGT CCCGAGAGGC GCAACGCTTT CCGTCCGCAG
ACGGTCGTTG AAATGATTCA GGCCCTCGAA AACGCAAGGA ATGACGAGAA CATCGGCGTC
ATTATCCTGA CAGGACAAGG CCCTCTGGCT TTCTGCTCGG GCGGCGATCA GAAAATCCGG
GGCGACGCCG GATACGCGGA CGAAAAAGGG GTCAACAGAC TCAACGTGCT CGACTTCCAG
CGCAACATCC GCACCTGCCC GAAACCGGTT ATCGCCATGG TTGCCGGTTA CGCGATCGGC
GGGGGCCACG TTCTGCATAT GCTCTGTGAC CTGACCATTG CGGCTGAAAA CGCTGTTTTC
GGTCAGACAG GGCCGAAAGT AGGCTCCTTT GACGGGGGCT GGGGAGCAAG CTACATGGCC
CGCCTTGTCG GTCAGAAAAA GGCTCGTGAG ATCTGGTACC TCTGCCGCCA GTACAACGCG
CAGGAAGCCC TCGACATGGG CCTCGTCAAC ACCGTTGTGC CTCTGGACAG ACTTGAGGAA
GAAACCGTTC AGTGGTGTCG TGAAATCCTG CAACATTCAC CGCTCGCGAT CAGATGCCTT
AAATCAGCCC TGAACGCTGA CTGCGACGGA CAGGCCGGTT TGCAGGAACT TGCCGGAAAT
GCGACGCTGC TCTACTATAT GAGCGAAGAG GCGCAGGAAG GAAAAAATGC TTTTGTTGAA
AAACGTAAAC CTGATTTCGG AAAATTCCCG AAAAGACCTT GA
|
|---|
| Protein sequence | MSTVNWIQSG DFTDIFYHKA DGIAKITINR PERRNAFRPQ TVVEMIQALE NARNDENIGV
IILTGQGPLA FCSGGDQKIR GDAGYADEKG VNRLNVLDFQ RNIRTCPKPV IAMVAGYAIG
GGHVLHMLCD LTIAAENAVF GQTGPKVGSF DGGWGASYMA RLVGQKKARE IWYLCRQYNA
QEALDMGLVN TVVPLDRLEE ETVQWCREIL QHSPLAIRCL KSALNADCDG QAGLQELAGN
ATLLYYMSEE AQEGKNAFVE KRKPDFGKFP KRP
|
|---|
| |