| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2073 |
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| Symbol | |
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| ID | 6375767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 2238259 |
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| End bp | 2238903 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642684564 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001960463 |
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| Protein GI | 189500993 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0814777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.412873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC AGACAGAGAC AACCCGTTAT AATTTGACCC GGCCGATAAT GCACACAAAT
CGACACTCTT TCCGGTTACT GATTTCCATG ATGGTTTTCA TGCTTTCAGG GTTGGCTGCT
CTGGGTTTTT CGGGTTGCGA CCCGGCATCA AATGAACTCA AAGAACGTCA ACAGGCGGTT
TGGCAAAACC CTGAAGATCC TCAGGCATAT ATCAGACTTG GAAACGAATA TGCAAAGCAA
CAGCTTTACG ACAAGGCTGT TGAAGCATAC GAAAACGCCC TTTCTCTTAA CCCTCAAAGC
GGCATCACCG TCTATCCTGC ACTTGGTGCG GCATATTTCA ACCGCCAGCA ATACACCGAA
GCACTCGGCT ACTTCAAGAA GAGTCTTGAA TATTCTCCGG AAGACTCTCT CAGGTTTTAT
GACATAGGAA ATGTTTATCT GCACCTGCAA AAATGTGATC TGGCAATTGA AGCATACCTT
CAGGCAATTG AAAACAGCAC AGCATTTCAG GAAGCACATT ACAATCTGGC AATCTGTTAC
ATAAGAACCG GCCAAAAAGC AAAAGCTCAG GATATTTATG CATGGCTTCA GGAGAAAAAC
AATTATCTTG CCGTCTCTCT GGAACGCCAT CTGGAAAATG ATTAA
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| Protein sequence | MTDQTETTRY NLTRPIMHTN RHSFRLLISM MVFMLSGLAA LGFSGCDPAS NELKERQQAV
WQNPEDPQAY IRLGNEYAKQ QLYDKAVEAY ENALSLNPQS GITVYPALGA AYFNRQQYTE
ALGYFKKSLE YSPEDSLRFY DIGNVYLHLQ KCDLAIEAYL QAIENSTAFQ EAHYNLAICY
IRTGQKAKAQ DIYAWLQEKN NYLAVSLERH LEND
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