Gene Cphamn1_2068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2068 
Symbol 
ID6375761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2230071 
End bp2231423 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content51% 
IMG OID642684559 
Productcitrate synthase I 
Protein accessionYP_001960459 
Protein GI189500989 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.355535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.380729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATGA CTGACGATAA GGGGAAAAAC TCTCTGACGA TCACGGATAA CCGCACAGGG 
ATCACCTATG ATGTGCCAAT AGAGTGCGGT ACCATAAAAA CAATGGATCT CAGACAGATC
AAGGTTTCGG ATGATGATTT CGGACTTCTG GGCTACGATC CGGGATTTCT CAATACAGCA
TCCTGCAAAA GCCTCATTAC CTTTATTGAC GGCGACAAGG GGATCCTTCG CTACAGGGGA
TACCCCATTG AGCAGCTTGC GGAGAAAAGC TCTTTTCTGG AAACAGCCTA TCTGCTTATC
AAGGGTGAGC TGCCGGACAG GGACCGGCTG GATGCCTGGA CACACAATAT ACAGATGCAT
ACCATGGTCC ATGCAAACCT GCAAAAGTTC ATGGATGGGT TTCGCTATGA CGGTCACCCG
ATGGGGATAC TGGTAGGTAC TGTCGGTGCG TTGTCTACCT TTTATCCGGA CGCCAAAAAA
ATTTTTGATG CAGAGTCGAG CCGGCTTCAG GTGCGTCGGC TTATCGGTAA AATGCCTACG
CTCGCCGCGA TGAGTTTCCG TCACAGTATG GGCTTTCCCT ATGTTCTTCC CGACAACGAC
CTGAGTTATG CGGGGAACTT TCTTTCCATG ATGTTCAAGA TGACGGAGTT GAAATACACT
CCCAACCCGG TACTTGAACA TGCGCTCGAT GTTCTGTTCA TTCTGCATGC CGATCATGAA
CAGAACTGTT CGACAAGCGC TGTGCGTTCC GTAGGCAGTT CACAGGTCGA TCCGTATTCC
GCGCTTGCCG CCGGCTGTGC CGCTCTTTAC GGGCCATTGC ATGGCGGGGC CAATGAGGCG
GTTATTCGCA TGCTGGAGAG AATCGGCAGT CTGGACAAGG TGCCGGAGTT CATCAAAACA
GTCAAATCGG GAGAAGGACG GCTTATGGGG TTCGGCCACC GGGTATACAA AAACTACGAT
CCGAGAGCCA GGATAATCAA AAAAATAGCC TTCGAGGTTT TTGAGGTCAC CGGCACCAAC
AGCTTGCTTG ATATCGCACT GGAACTTGAA AGAATCGCTC TCGAGGACGA GTACTTTATC
AGTCGTAAAC TCTATCCGAA CGTTGATTTC TATTCCGGAC TGATCTATCA GGCGATGGGA
TTCCCGCTGG ATATGTTTCC CGTGCTCTTT GCTATCGGAA GGACTCCCGG CTGGCTGGCA
CAGTGGATGG AGCATATGAG CGATGACGAG CAGAAGATCT CCAGGCCGAG ACAGATGTAT
CTCGGTGACG AAGCTCGTGA CTATGTTCCT ATCGGGGAAA GGCAGAAACC CTCCTATCCT
GTTGAGAAAA AGATAGGCAT TTGCAGGTTG TAG
 
Protein sequence
MIMTDDKGKN SLTITDNRTG ITYDVPIECG TIKTMDLRQI KVSDDDFGLL GYDPGFLNTA 
SCKSLITFID GDKGILRYRG YPIEQLAEKS SFLETAYLLI KGELPDRDRL DAWTHNIQMH
TMVHANLQKF MDGFRYDGHP MGILVGTVGA LSTFYPDAKK IFDAESSRLQ VRRLIGKMPT
LAAMSFRHSM GFPYVLPDND LSYAGNFLSM MFKMTELKYT PNPVLEHALD VLFILHADHE
QNCSTSAVRS VGSSQVDPYS ALAAGCAALY GPLHGGANEA VIRMLERIGS LDKVPEFIKT
VKSGEGRLMG FGHRVYKNYD PRARIIKKIA FEVFEVTGTN SLLDIALELE RIALEDEYFI
SRKLYPNVDF YSGLIYQAMG FPLDMFPVLF AIGRTPGWLA QWMEHMSDDE QKISRPRQMY
LGDEARDYVP IGERQKPSYP VEKKIGICRL