| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2059 |
|---|
| Symbol | |
|---|
| ID | 6375752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2222325 |
|---|
| End bp | 2224484 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642684550 |
|---|
| Product | ATP-dependent DNA helicase RecG |
|---|
| Protein accession | YP_001960450 |
|---|
| Protein GI | 189500980 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1200] RecG-like helicase |
|---|
| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0316192 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGGCT GTCAGGGAGA GAGGATTGTG CCGGGACAAA GACCAAATGA TATACCTGTA
ACCTGCATCA GGGGGGTCGG CCCGCGCAAG GCCGCTCTGT TAGGGCAGTC AGGAATAGAG
ACAATAGCCG ATCTGTATGA CTTTTTTCCT CGACGATATC TTGACAGGAG GATCATAAAG
CCTGTTAGCG GACTTGTCGA GGGAGAGCCG GCGACGGTCG TCGGAACGGT TACAAAGGTA
TACAGGCAGC ATGCACGACC CGGCCATTCC CGCTTGAATG TTACTCTTCT GGACAAATCA
GGAGAGCTTG AGCTGGTCTG GTTCAGGAGT GTGTCCCATG TTTCCGCTGC TGTGAGGCAG
GGTGATACCC TTGCGGTTCA CGGTAAAGTG GTTTTTTTCG GTCGTCAGCG GCAGATGCAG
CATCCGGAAT ATGAACGTCT GAACCCTGAT GCGCATGGCA GTACCGAGGA CGGGGATGAT
GTTTCCGCTC TCTTGTACAC AGGTAAAATA GTGCCTGTAT ACCCGTCATC CGAAGCCCGC
AAAGGAGCGG GGATGGGACC AAAAGGGATG AGAGGGCTGT TGGAGAAAGC GTTCACCCTG
AACCCTCCGT GTTTCAGGGA AAACCTTTCC GAAAAGATTA TCAGTCAGTA CGGTCTTCTG
CCGATCAACC AGGCGTACCG GATGATTCAT TTTCCTTCCT CGCCTGAAAT GCTTGAACGC
GCGCTTTACC GGTTTAAATG GACTGAACTG TTCTATGCCC AGCTTTTTTT CGCTATCCGC
CGCACAGCCC TTAAGGAACA GAACCGTGCC GTTCGTTTTG AGCGTTCAGG ACTCTTTACC
AAAAGGCTCT ATGCGTCTTT GCCCTTCGTT ATGACCGAAG CACAGAAAAA AGCGGTAAGG
GAAATTTACC GTGACTTGCG CAGCGGTATA CGGATGAATC GTCTCCTGCA GGGCGATGTC
GGTTCAGGCA AAACTCTTGT CGCCATGTTT GCCATGGCGC TTGCTGCTGA TAACGGCTTG
CAGGCAGCGT TTATGGCCCC TACAGAAATA CTCGCCTTTC AGCACTACAT GGTATTGAAA
AAAAACGAAG GGGCGCTCGG GCTTCGCATC GGTTTTCTCA GTGGTCGTCA GAAAGCAAAA
GAGCGAAGGG ACGTGCTTGA CCGGCTTGAA GATGGTCGCC TCCATATCCT TGTTGGAACC
CATGCCGTTA TTGAAGAGGG GGTGCGTTTT AAAAAGCTCG GTCTTGCTGT TATTGACGAG
CAGCATCGCT TTGGGGTGTT GCAGCGTAAG GCGTTGCAGG ATAAGGCTGG AAGCCCTCAT
ATTCTGCTTA TGACAGCGAC ACCTATTCCG AGAACTCTGG CTATGGGAGT TTACGGAGAT
CTCGATGTCA CGGTGATCGA TCAGCTTCCT TTTGGCAGAA AGCGTGTTGT TACCCGGATG
CGCAGTGAGC GTCAGAAAAA TGAGGTTCTC GCAGTTCTCC GTCAGGAAAT TGAGAAGGGA
AGGCAGGCAT ATATTGTCTA TCCTCTTGTT GAAGAGTCCA AAAAAATTGA TCTTAAGGCG
GCAACAGAGA GTTTTCTTCA GTTGCGTGAC GAGCTTCTGC CCGGCCTCCG GATCGGTTTA
CTGCATGGCC AGATGCGTTC AGAGGAGAAA GAGTCTGTTA TGGAGCGTTT CAGGTCCGGC
ACGCTTGATC TGCTTGTAGG AACAACGGTT ATTGAGGTTG GTGTCGATGT TCCAAATGCC
TCGGTTATGG TAATCGAGCA TGCTGAACGT TTCGGTCTCG CACAACTTCA CCAGTTAAGG
GGAAGGGTCG GAAGAGGGGC GGAGCAGTCG TACTGTTTTT TACTGCACGC CGCTGTCGGA
GGGGATGCGC GGGAAAGGCT TGCCGCCATG GAGCGGAACC ATGACGGGTT CCGGCTCTCC
GAGATTGATG CCTCATTGCG CGGTACGGGT AATGTGCTCG GCAAAGAGCA GTCCGGGACG
ATGACCGGGA TGAAGGTTGC CGACATTGTT CGTGATTACG ATATCATGTG TTCTGCAAGA
GAGGCGGCCA TTGAGACGGT CGAGCAGGAC AGCGCCCTCA GTGATCATGC TCATGACATG
ATACGTGAGC AGTATAGGCG ACTTTGTCAT GAACGGTTTG CATTGGCGGA TATCGGTTAA
|
|---|
| Protein sequence | MRGCQGERIV PGQRPNDIPV TCIRGVGPRK AALLGQSGIE TIADLYDFFP RRYLDRRIIK
PVSGLVEGEP ATVVGTVTKV YRQHARPGHS RLNVTLLDKS GELELVWFRS VSHVSAAVRQ
GDTLAVHGKV VFFGRQRQMQ HPEYERLNPD AHGSTEDGDD VSALLYTGKI VPVYPSSEAR
KGAGMGPKGM RGLLEKAFTL NPPCFRENLS EKIISQYGLL PINQAYRMIH FPSSPEMLER
ALYRFKWTEL FYAQLFFAIR RTALKEQNRA VRFERSGLFT KRLYASLPFV MTEAQKKAVR
EIYRDLRSGI RMNRLLQGDV GSGKTLVAMF AMALAADNGL QAAFMAPTEI LAFQHYMVLK
KNEGALGLRI GFLSGRQKAK ERRDVLDRLE DGRLHILVGT HAVIEEGVRF KKLGLAVIDE
QHRFGVLQRK ALQDKAGSPH ILLMTATPIP RTLAMGVYGD LDVTVIDQLP FGRKRVVTRM
RSERQKNEVL AVLRQEIEKG RQAYIVYPLV EESKKIDLKA ATESFLQLRD ELLPGLRIGL
LHGQMRSEEK ESVMERFRSG TLDLLVGTTV IEVGVDVPNA SVMVIEHAER FGLAQLHQLR
GRVGRGAEQS YCFLLHAAVG GDARERLAAM ERNHDGFRLS EIDASLRGTG NVLGKEQSGT
MTGMKVADIV RDYDIMCSAR EAAIETVEQD SALSDHAHDM IREQYRRLCH ERFALADIG
|
|---|
| |