| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2040 |
|---|
| Symbol | |
|---|
| ID | 6375733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 2199083 |
|---|
| End bp | 2201812 |
|---|
| Gene Length | 2730 bp |
|---|
| Protein Length | 909 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642684531 |
|---|
| Product | surface antigen (D15) |
|---|
| Protein accession | YP_001960431 |
|---|
| Protein GI | 189500961 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.813925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTTCT GGAGCTGTCT TCTGGTGTTT CACGCTCCTG CACCGGTTCA GGCTGAAAAC
AGGAGCGTTG TGTATCCCGA TACTCTCGAT CTGCCGGTAC GACGCGTTGC CATAGCACCC
TACATGAGAG CCGCGAGAAA AACGGTGGGA CTCGCTCTTT CGGGAGGGGG GGCCAACGGT
CTGGCCCAGA TCGGCGTGCT CAAGGCTCTT GAAGAAGAAA ACATCCCTGT CGACGCCATA
GCAGGCACCA GCATAGGCGC TGTTATAGGA GGACTCTACA GCACCGGATA TAACGCCGAA
GAACTTGAAA GGATAGCGGT CAGCATACCC TGGAAAGAAC TCCTTTCCCT TGAAAATGAC
GCGCCAAGAG CTAAAACATT TCTTGAACAG CAGAAAATCC GCGACAGGGC AACCATAGCC
ATACGTTTCG AGAACTTTAA ACTGGTTATC CCCAGGTCAC TGAGCTCGGC ACAAAAGCTG
ACGAGAACCC TCGACCTGCT CACCATGAAC GCCCTCTACC ATCCTGAAGG CTCGTTCAGC
TCCCTTCCGG TCTCATTCAA GGCCGTCACA ACCGACCTGG TATCGGGAAA ACGCGTCACG
CTTTCAGAGG GGACGCTTTC AGAAGCGATG CGAGCAAGCA GTACCATACC GATTATCTTT
GAGCCGATCG GGCTTGGCAA ACAGAAGCTC GCCGACGGCG GACTTGTAGC AAATCTCGCT
GTAGACGAGC TGGAAAACGC TTCACTTGAT TACAAAATCG GGGTTGACAC CAGAGGCAGC
ATGTATACCC TCGCGGAAGA TATCGACATC CCCTGGCAGG CGGCAGACCA GACCATGACG
ATACTCATCG AACTGCAGTA CCCTCGTCAG CTTGAAAAAG CCGACCTTAT CATCACGCCG
GATGTCGGCA ACAACCCTGC CATTGATTTC TCACAACTTG ACAAACTGAT GAGCGCGGGA
TACGTCAGCG GAAAAGCTCT GGCCGGTAAA ATCCGCCAGG ATATCCAACT GCCCGCTCAA
AGAAAAACCG GCATATCTTC GTACAAAAAA ACACTCAGGG TCTCGGGCAG CGGCAGAAAA
ATAGTGAGCC GGTACCTCGC CGCGAGCGAA ATAATACGTA ACGCCTCCTA TGCGGAGGAA
GCGTTGAAAG CGCTGCTTGA AACAGACCGT TTCACGAAGG TATATGCGGA GGTCAATCCT
CGCCTCGGAG AGGCTGTGTT TTTTTGTGAA ACCCCGCCTT CATTTGATAC TGTTGAGCTG
ATCGACCCGG TAACCGGGAT AGAACAAAAA GAACTTGACG CCTGTTTCAG GACGCTGACA
GGAAAAAGCT ACACCAATGC CCAGGGAACA GAAGCGCTGG AAAAACTGGT AAAGATCTTC
AGGAACAAAG GCTACCCGCT TGTCGACATC GCATGGATAC AGGTATCCGA CGACACACTT
TCCATAAAGC TTTCCGAAGG AAAAATAGCC TCCCTTGACG TCTCAAAAGA CAAGAACATC
ACCGGAACCA CTCCTGTCAT GAGGGAGCTG TCCATTGATA CATCAAAAAC GCTCAGGCTG
AAAGATATCG AACGTTCAAT TGACAACCTG TTTGGAACAG GAGCTTTCAA CCGCGTCTCC
ATCGGAATAT CAGGGAACGA CTCTCTTGCC GCCCCGACAG GGAAAAGAAC GCTCAGGATA
AGGCTCAATG AAAAGCCCTC CAATGTCCTG AGACTGGGGG TTCATTACGA TAACACCTAT
AATGCCCAGG CCCTCATCGA TTTCAGAAAT GAAAACCTTG GCGGAACAGC CAACTCCATC
GGGGGATGGA TGAAAATCGG AGAAAAAAAC AACCGGGCAA ACCTTGAATT CAATATGCCG
CGGATCGGCA GCACAAGCCT GACCTTCACG ACAAAACTGT TTTATGACCA GCGTAACCTG
GACATACGCC ACCCTGAATT CTCCGGCAGG TTTCTCTTCC CAGGTTCTGA ACAGATCGGA
CAGTTCGGCA TTCAGCGCTA CGGCATCACC TCTTCTATTG GAGCCAGAAT TGAAAAAAAC
AGTCAGTTCC TGCTTGATCT GACCATGAAA AACACGCAGA CCTACAACAG GGGAGGCGGC
AATTTCACCG CTGAAAACAA TGACATCGCG TCGGCGGCCG TAGAGTTCGC TCTCGACACA
AGAGACAACT CCTTTCTCCC GAAAGAAGGA CGGCACACCA ATCTGCGCTA CTCGTTCACG
CCTGAGCTGC TTAATGATAT CTCCTTCTGG AAACTGCTTC TTGCACATGA GGAGAACCTC
TCTTTCAGCG AAAGGGTTTC AGGCCAGCTC AGACTCGCTC TCGGCCTGAG CAGCCCTGGA
ATTCCTTTTT CGGAAAGGTT TTTCCTCGGC GGTGCAGGCA GTGCATACAG CAGCAGATTC
ATCGGCTTGA GAGAAAATGA TCTCATTGGC GGCAACATGG TTTCCCTTGG AACGTCGTTC
CGGTACAGTC CCCCTTTTGA CCTGATATTT CCCACCTCGT TTCTGTTGTA CTATACTGCA
GGTAACGTCT GGGAAACCAG AGCGGCAATT TCAGCTGCGG ATCTTGTTCA CGGCATCGGA
GCCGGCGTGC AATGGGATAC ACCTATCGGC CCTGCGCGCT TCACTGCCGG AAAAGCGTTC
ATCACCAGTG ACGGCCAAAG CTACAGAGAC TATTCAGATT TGCGGTTTGC CGAAACGCTG
CTCTATTTCA GCCTCGGGCA CGAGTTTTAA
|
|---|
| Protein sequence | MLFWSCLLVF HAPAPVQAEN RSVVYPDTLD LPVRRVAIAP YMRAARKTVG LALSGGGANG
LAQIGVLKAL EEENIPVDAI AGTSIGAVIG GLYSTGYNAE ELERIAVSIP WKELLSLEND
APRAKTFLEQ QKIRDRATIA IRFENFKLVI PRSLSSAQKL TRTLDLLTMN ALYHPEGSFS
SLPVSFKAVT TDLVSGKRVT LSEGTLSEAM RASSTIPIIF EPIGLGKQKL ADGGLVANLA
VDELENASLD YKIGVDTRGS MYTLAEDIDI PWQAADQTMT ILIELQYPRQ LEKADLIITP
DVGNNPAIDF SQLDKLMSAG YVSGKALAGK IRQDIQLPAQ RKTGISSYKK TLRVSGSGRK
IVSRYLAASE IIRNASYAEE ALKALLETDR FTKVYAEVNP RLGEAVFFCE TPPSFDTVEL
IDPVTGIEQK ELDACFRTLT GKSYTNAQGT EALEKLVKIF RNKGYPLVDI AWIQVSDDTL
SIKLSEGKIA SLDVSKDKNI TGTTPVMREL SIDTSKTLRL KDIERSIDNL FGTGAFNRVS
IGISGNDSLA APTGKRTLRI RLNEKPSNVL RLGVHYDNTY NAQALIDFRN ENLGGTANSI
GGWMKIGEKN NRANLEFNMP RIGSTSLTFT TKLFYDQRNL DIRHPEFSGR FLFPGSEQIG
QFGIQRYGIT SSIGARIEKN SQFLLDLTMK NTQTYNRGGG NFTAENNDIA SAAVEFALDT
RDNSFLPKEG RHTNLRYSFT PELLNDISFW KLLLAHEENL SFSERVSGQL RLALGLSSPG
IPFSERFFLG GAGSAYSSRF IGLRENDLIG GNMVSLGTSF RYSPPFDLIF PTSFLLYYTA
GNVWETRAAI SAADLVHGIG AGVQWDTPIG PARFTAGKAF ITSDGQSYRD YSDLRFAETL
LYFSLGHEF
|
|---|
| |