| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2038 |
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| Symbol | thyX |
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| ID | 6375731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 2197303 |
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| End bp | 2197965 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642684529 |
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| Product | FAD-dependent thymidylate synthase |
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| Protein accession | YP_001960429 |
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| Protein GI | 189500959 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.81292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.670148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTCC GCCTGATTGC CGTAACAAAT CCGCTTGTCG AAATCCAAAA CGAAAAACTC
AGCCCTGAAG GGCTTATCGC ATACTGCGCC AGGGTATCGA GCCCGCATCA GGAGAATCTC
GATTATGAGA AGCTGCTTGC CTACTGCATT AAAAACAGGC ACTGGAGCAT TTTTGAAATG
GTCGACATGA CGGTTGAAAT CGTCACCTCC CGTGCGATTT CCCCGCAGAT ACTGCGTCAT
CGCAGTTTTG TCTTCCAGGA ATTCTCCCAA CGCTACGCCA AAGTCAATAA TTTTGAAACC
TGCTCTCCCA GAAGACAGGA CAGCAACAAC CGCCAGCACT CGATAAACGA CCTCGATGCA
TCGACAACCC GTTGGTTTAC CGATGCTCAG GAGGAGATAC GCGCGCTTTC CGTTGAAAAG
TATAACGAGG CTCTTGAGAA GGGAATCGCC AGAGAGTGCG CGAGAATGCT TCTGCCGCTC
AACACACAGA CAAAACTCTA TATGAAAGGA TCGGTAAGAA GCTGGATCCA CTACATAGAA
GTCCGTACCG ATGCCGGCAC CCAGAAAGAG CACCGGGATA TCGCGCAAGA AGTCCGGGAT
ATTTTCATCA CTCAGTTCCC CGTTACCGCT TCGGCACTCG GCTGGTCCGC TTCGGCAAGA
TGA
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| Protein sequence | MKVRLIAVTN PLVEIQNEKL SPEGLIAYCA RVSSPHQENL DYEKLLAYCI KNRHWSIFEM
VDMTVEIVTS RAISPQILRH RSFVFQEFSQ RYAKVNNFET CSPRRQDSNN RQHSINDLDA
STTRWFTDAQ EEIRALSVEK YNEALEKGIA RECARMLLPL NTQTKLYMKG SVRSWIHYIE
VRTDAGTQKE HRDIAQEVRD IFITQFPVTA SALGWSASAR
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