Gene Cphamn1_2032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2032 
Symbol 
ID6375725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2189321 
End bp2190232 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content48% 
IMG OID642684523 
Productband 7 protein 
Protein accessionYP_001960423 
Protein GI189500953 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.953686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAC TCCTGTTTCT CGGCGTTATT CTTTTGTTCA TAGGCATTAC CGCCCGCACC 
CTCAATCCTT CATTGCTGCG GTTTTCAGGG CTGTTTAAAC TAGGCGGCAT ATTCGCTATT
ATTTTAGGCC TTCTGACGGC AAGCATCCGT ATTGTCGAAC CCGGTAAAGT CGGCGTTAAA
GTACTGTTCG GAAAGGTCCA GCAGGAAGTG CTCGGCAGCG GACTGAACAT CATCAACCCG
CTGGTGAAGC TCGAATTCTT TGATATCACC ACCCAGACCT ATACGATGTC CGGAACTGAA
TCCGAGCTCA CCCAGTTAAG TGACGCACCG ATACGAGTGC TGAGCGCGGA CGGCCTTGAG
GTCACCATCG ACATGACCGT GCTCTACCGC ATCAATCCTG CTCAGGCACC TGAAATTCGC
AGAGAGATCG GCCCGGGACT TTCCTATATC GATAAAATCG TTCGTCCGAC AGCCAGAACA
CGCATAAGGG ACAATGCTGT CAGCTACAAT GCAATAGACC TTTATTCAAA AAAACGGGAA
GAATTTCAAA CAAAAATTTT TGACAGCATC AGTGCTGATT TTGACAGCCG CGGTCTGATT
CTCGAGAATC TGCTTGTTCG CAACATCTCC CTGCCCGAGT CGGTAAAAGC CGCGATCGAG
GCAAAGATCA ATGCTGAACA GGAAGCCCAG AAAATGGAGT TCGTTCTGCA GAAGGAGACC
CAGGAAGCTG AAAGAAAACG TGTCGAAGCA AAGGGTATTT CCGACTATCA GCAGATCCTT
GCACGATCAC TGACTGATAA ACTACTGAAA TACGAACAGA TAAAAGCCCT GCAGAACCTT
GTGAAATCAG AGAACTCAAA AGTCATCATT ATGGGCGACG GCAAAGGAGC CTCCGTTCTT
ATCGGGCAAT AA
 
Protein sequence
MTSLLFLGVI LLFIGITART LNPSLLRFSG LFKLGGIFAI ILGLLTASIR IVEPGKVGVK 
VLFGKVQQEV LGSGLNIINP LVKLEFFDIT TQTYTMSGTE SELTQLSDAP IRVLSADGLE
VTIDMTVLYR INPAQAPEIR REIGPGLSYI DKIVRPTART RIRDNAVSYN AIDLYSKKRE
EFQTKIFDSI SADFDSRGLI LENLLVRNIS LPESVKAAIE AKINAEQEAQ KMEFVLQKET
QEAERKRVEA KGISDYQQIL ARSLTDKLLK YEQIKALQNL VKSENSKVII MGDGKGASVL
IGQ