| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2030 |
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| Symbol | |
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| ID | 6375723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2183588 |
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| End bp | 2185660 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642684521 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001960421 |
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| Protein GI | 189500951 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0667365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.695875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAA AAGGAGAGCA GGTGTTCAGG CTTGAAAGCA GTTATGAACC AGAAGGAGAC
CAGCCCCAGG CGATCGAGGC GCTGCGGCAG GGTGTTATGG ATGGCCAGAC AAACCAGGTA
CTGCTCGGGG TAACCGGTTC AGGGAAGACC TTTACCATGG CAAATGTCAT TGCGGAGGTG
AACAAGCCTG TATTGCTGAT CAGTCACAAC AAGACGCTCG CAGCACAGCT TTACGGGGAA
CTGAAACAGT TTTTCCCTCA TAACGCGGTG GAATACTTCA TCAGTTACTA TGATTTTTAC
CAGCCGGAGG CCTATATCCC GACGATGGAT AAATACATAG CGAAAGATCT GAAGATTAAC
GACGAGATCG AGAGGCTTCG GCTCAAAGCC ACCAGTTCGC TTCTCAGCGG CAGAAAAGAT
GTGATCGTTG TCAGTTCGGT GAGCTGTATC TACGGCCTCG GGGCTCCGGA AGACTGGAAG
GCGCAGATCA TCGAACTCAG GGTGAACATG GAAAAAGAAC GGGACAGCTT TCTGCAGGAA
CTGATTTCGC TCCATTTTGT TCGTGATGAC AGTGACCTCG CTCCCGGAAA ATTCAGGGTA
CGCGGTGATG TCATCGATCT TGTTCCCATG CACGAAGAGA GCGCGTTACG GGTGGAGTTT
TTTGGCGACG AGATAGAACG TCTGCAGCTT TTCGATCATA CGACCGGTGA GATATTTGAA
GACGAGGAGT ATGCTTTTAT CTATCCGGCA CGCCAGTTCG TTGCAGGAAG GGAGAAACTG
CAACAGGCCA TGCTGGGTAT AGAAGACGAG CTTGCTCATC GCCTGAACGT GTTTCGTTCA
GGAGAAAAGT TTGTTGAGGC CCGGAGGATC GAGGAGAGAA CCCGCTATGA TCTCGAGATG
ATCAAAGAGC TTGGATACTG TTCAGGAATA GAAAACTATT CCCGTCATCT TTCAGGGAGA
AAGGCGGGGG AACGTCCGTA CTGTCTGCTG GATTATTTTC CTGAAGATTA TCTGGTGATC
GTTGACGAGT CGCATGTGAC CTTTCCCCAG ATTCGCGGTA TGTATGCCGG GGACCGTTCA
AGGAAAACCA TACTTGTGGA GTACGGTTTC AGGCTTCCTT CCGCCCTCGA TAACCGTCCG
CTGCGCTTTG AAGAATTTGA AACCATGGTG CCGCAGCTGA TCAGTGTCAG CGCCACACCG
GGGGACTATG AACTCAGGCG GTCGGGAGGA TCGGTGGTCG AGCAGCTTGT GAGGCCGACC
GGTCTGCTTG ATCCAGAGAT CGTTGTTCGC CCGGTCAACG GGCAGATTGA CGATCTTCTC
GAAGAGATCA GGAAGCATAC CGGAAAAGGC TTCAAGAGCC TGGTCATGAC GCTGACCAAG
CGTATGAGCG AAGATCTTCA TGATTATCTC AGAAAAGCCG GATTGAGAAC CCGCTATCTC
CACTCTGAGA TAAAGAGTCT TGAAAGGATG CAGATCCTCA GGGAGTTGCG AACCGGAGAG
ATAGATATCC TCGTCGGAGT CAATCTTTTG CGTGAAGGCC TTGACCTTCC CGAGGTATCG
CTCGTAGCCA TTCTTGATGC TGACAAGGAG GGTTTTCTCC GCGACAGTAA ATCCCTGATG
CAGATCGCGG GCCGCGCTGC CAGGAATGTT GAGGGGATGG TTGTGTTTTA CGCCGACCGG
ATAACCGCAT CCATGCGGTA TGTTATCGAT GAGACAGAAC GGAGAAGGAG TGTACAGAGG
AAATTCAATG AAGACCACGG GGTTATTCCG GCTTCTATCG TTAAATCGGT CGATCAGGTG
CTTGATACAA CCGGTGTCGC TGATGCGGAG GACCGGTTCA GAAGAAGGCG CTTCGGGCTG
GAGCAGCGCT CCCGGAGAGG TATCGAGGAT CTTGTCGGTT CCCTGAAACG CGAGGATCTT
TATGCGATGG CTGAAGAGCT GAGACTGGAA ATGCAGGAGG CGGCGGAAAG CATGGAATTT
GAAAAAGCGG CATATCTTCG GGACGAAGTC ACAAAACTGG AGGATGCCGC GGAGGAAAAA
CGAGAGAGCG AAGGGGGAAT GGATAGTGGA TAG
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| Protein sequence | MKGKGEQVFR LESSYEPEGD QPQAIEALRQ GVMDGQTNQV LLGVTGSGKT FTMANVIAEV
NKPVLLISHN KTLAAQLYGE LKQFFPHNAV EYFISYYDFY QPEAYIPTMD KYIAKDLKIN
DEIERLRLKA TSSLLSGRKD VIVVSSVSCI YGLGAPEDWK AQIIELRVNM EKERDSFLQE
LISLHFVRDD SDLAPGKFRV RGDVIDLVPM HEESALRVEF FGDEIERLQL FDHTTGEIFE
DEEYAFIYPA RQFVAGREKL QQAMLGIEDE LAHRLNVFRS GEKFVEARRI EERTRYDLEM
IKELGYCSGI ENYSRHLSGR KAGERPYCLL DYFPEDYLVI VDESHVTFPQ IRGMYAGDRS
RKTILVEYGF RLPSALDNRP LRFEEFETMV PQLISVSATP GDYELRRSGG SVVEQLVRPT
GLLDPEIVVR PVNGQIDDLL EEIRKHTGKG FKSLVMTLTK RMSEDLHDYL RKAGLRTRYL
HSEIKSLERM QILRELRTGE IDILVGVNLL REGLDLPEVS LVAILDADKE GFLRDSKSLM
QIAGRAARNV EGMVVFYADR ITASMRYVID ETERRRSVQR KFNEDHGVIP ASIVKSVDQV
LDTTGVADAE DRFRRRRFGL EQRSRRGIED LVGSLKREDL YAMAEELRLE MQEAAESMEF
EKAAYLRDEV TKLEDAAEEK RESEGGMDSG
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