| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2029 |
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| Symbol | |
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| ID | 6375722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2180782 |
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| End bp | 2182977 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642684520 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001960420 |
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| Protein GI | 189500950 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0317359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.45293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGCAC AGATAGAAAA AGAGCAGTAT GAGAAAATGC ATGAGATCCT GCGGCTTGCC
CGCCAGAATC TCAGGGATTT CGACGAATCC CTGATCCAGA GGGCATTTTT TCTGTGTTAT
CGGGCGCACG AAGGTGAAAA ACGCGCTTCC GGGGAGCCGT TTTTCTATCA TCCCGTTGAA
GTTGCCAAGA TCATGCTGAC CGAACTTCCT CTTGACGGAG TCTCGGTTGC TGCCGCTCTG
CTGCATGATG TTATTGAAGA CAGCGAGTAT ACCTATGAGG ATCTTACTGC CGAGCTGGGA
AGTGAAGTAT CGGATATCGT GGAAGGCCTG ACCAAGATAT CCGGGATCAT GATCAACCGG
GAGATCACCC AGGCTGAAGG TTTTCGCAAG ATGCTGCTCT CCGTGGTAAA AGATGTGCGG
GTTATTCTGA TAAAGTTCTG TGACCGTCTG CACAATATGA GAACCCTCGA CGCGCTTCCC
GAGCATCGCC GCCTGAAGAT CGCGCTCGAA ACGAGAGACA TCTATGCGCC TCTTGCTCAC
CGTTTCGGTC TTGGAAAGAT GAAGATCGAG CTTGAGAATC TTGCCTTTAA ATACATCGAT
CCGGATATGT TCGAGAAGGT ACAGAAGAAA GTGCGTCTCA GCAGGGGGGA GCGCATAGCA
TATCTCGACA AGATGATTGT GCCGATCAAG CGGGACCTTG AAAAGCAGGG GTTCAGGATA
GAAGCTCAGG GCAGGGCCAA ACACCTGTTT TCCATCTACA ACAAGATGCG CAACAAAAAC
AAGAAGTTCG AGGATATACA TGATCTGTAC GGTATCAGGA TAATTATCGA TACCGAGCGG
ATTTCGGACT GTTTCGCGGC TTACGGCTAT ATTACCCAGA AGTATCCTCC GCTTCCTCAG
CACTTCAAGG ACTATATTTC CATACCGAAA CACAACGGCT ATCAGTCGCT TCATTCAGCG
ATACTGGGGC CGAAAGGAAG AGTGATCGAA GTACAGCTGA GAACGAGAAG GATGCATGAA
TTTGCCGAGT TCGGAGTTGC TGCCCATTGG AGGTATAAAG AGAAGGTTTC CAAGGACGAT
GCAAGTATTG ACAGCTTCCT GAAGTGGGCA CGTGATCTTA TCAATGATGC CGATTCAGCA
GCTTCATTTA TGGAAGGCTT CAAGCTGAAC CTTTATCATG AAGAGATCTA TATTTTTACA
CCGAAAGGTG ATATGAAAAC GCTTCCCGCG GGATCAACGC CGATTGATTT CGCATACGCG
ATTCATACAG AGATCGGTAA CGGGTGTATC GGCGCCAAAG TGAACGGAAA GATTGTCCGT
CTGAACTCTG AGCTGAAATC CGGCGATCGG GTCGAGATCA TTATCTCGAA AAACCAGAAA
CCGAAAGTTG ACTGGCTGAA GACGGTCAAG ACCCATCGCG CGCGCATCAA GATTCGCTCT
GCCATAAACG AGGAACGCCG TATTCAGATT GAAAAAGGGC GCAACATGTG GGACAAGATG
CTCTCCAGTA CGAAAAAGCT TCTGACAGAA AACGATATTA TCAAGCAGGT CAGAAAATAC
GGTATCAAGA CTCCTGCTGA TTTCTTCAGC GCGTTGGCAA ATCAGCAGAT CGACGGTCAA
AAAGTGATCC AGAGCCTCGC GGAACAGGAG CATCCGCCTT TCACGGCTGA AAAAAATGAC
GATGACGGAT TGGGTTTCGA TACGTTCGCT GAACAGGCAC GAAAGGGAAG AGAGGGCGAG
CTTTTCGGGA AAGATGAGGT TATTATCGAG GGATTGCCCA ATATCGCTTA CTCCTATGCC
AAATGCTGCA AGCCGGTACC CGGTGACGAT ATCATCGGTT TTGTGACCAG AGAGGGCGTC
GCGAAGATTC ATAGAAAAAA CTGTGTGAAT GTCAGCAACA AGAGCCTGCT CAAAAGTGAG
CGCGTCGTCA GTGTCGCATG GAACAGAAAA GTTGAAACGG AATTTCTCGC GGGAGTCAAG
GTGATCGGGG AGGACAGGAT GGGTATTACC AACCATATAA CCGCTGTTCT CTCAAAATCA
GACATCAATA TTCGCAGTAT CTCTCTCCAT GCCAGAGACG GCATGTTCAT CGGGACAGTG
ATGATCTACG TTCGGAATAT ATCCCGTCTC AAGGCGCTTA TTGATAAAAT CAAGAAAGTA
CAGGGGGTTT TTTCCGTCGA GCGTCTCAGT AGCTGA
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| Protein sequence | MLAQIEKEQY EKMHEILRLA RQNLRDFDES LIQRAFFLCY RAHEGEKRAS GEPFFYHPVE
VAKIMLTELP LDGVSVAAAL LHDVIEDSEY TYEDLTAELG SEVSDIVEGL TKISGIMINR
EITQAEGFRK MLLSVVKDVR VILIKFCDRL HNMRTLDALP EHRRLKIALE TRDIYAPLAH
RFGLGKMKIE LENLAFKYID PDMFEKVQKK VRLSRGERIA YLDKMIVPIK RDLEKQGFRI
EAQGRAKHLF SIYNKMRNKN KKFEDIHDLY GIRIIIDTER ISDCFAAYGY ITQKYPPLPQ
HFKDYISIPK HNGYQSLHSA ILGPKGRVIE VQLRTRRMHE FAEFGVAAHW RYKEKVSKDD
ASIDSFLKWA RDLINDADSA ASFMEGFKLN LYHEEIYIFT PKGDMKTLPA GSTPIDFAYA
IHTEIGNGCI GAKVNGKIVR LNSELKSGDR VEIIISKNQK PKVDWLKTVK THRARIKIRS
AINEERRIQI EKGRNMWDKM LSSTKKLLTE NDIIKQVRKY GIKTPADFFS ALANQQIDGQ
KVIQSLAEQE HPPFTAEKND DDGLGFDTFA EQARKGREGE LFGKDEVIIE GLPNIAYSYA
KCCKPVPGDD IIGFVTREGV AKIHRKNCVN VSNKSLLKSE RVVSVAWNRK VETEFLAGVK
VIGEDRMGIT NHITAVLSKS DINIRSISLH ARDGMFIGTV MIYVRNISRL KALIDKIKKV
QGVFSVERLS S
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