Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2027 |
Symbol | |
ID | 6375720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2179151 |
End bp | 2179738 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642684518 |
Product | LemA family protein |
Protein accession | YP_001960418 |
Protein GI | 189500948 |
COG category | [S] Function unknown |
COG ID | [COG1704] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.90664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.597952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCG GTTTATTCAG AGTTATTATG TTAGTCCTTA TAACCGGCAT GTTCACCGGT TGCGGCTATA ACACCATGCA GCAGAACGAA GAAGCGGTCA ATAAGTCATG GGGTGATCTT GAATCACAGT TACAGCGAAG AGCTGATCTG GTTCCAAACC TTGTTTCAAC CGTAAAGGGT GCAGCTGATT TTGAACAGGA AACACTCACC AGGGTTATTG AGGCCCGCTC AAAAGCCTCA TCAGTTCAGC TTACTCCTGA AATGCTCAGT GATCCGGCTG CGATGGCGAA ATTTCAGAGC GCGCAGGGCG AGCTTTCGTC CATGCTTTCC CGTCTCATGG TCGTTGTCGA GAGGTATCCC GAGCTGAAAG CCAACCAGAA CTTCAGGGAT CTTCAGAATC AGCTGGAGGG TACCGAAAAC AGGGTCAGTG TAGCTCGACA GCGATACAAC GGAGCGGTAG AGACGTTCAA CTTTTCGATC AGGATGTTTC CAAACTCCCT GACCAACGGC ATTGTTCTTC ATTTAAAGCC CAAAGAGTAT TTCAAGGGCG ATGCAAGTTC TCAACAGGTC CCGCAGGTTG AATTCTGA
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Protein sequence | MKSGLFRVIM LVLITGMFTG CGYNTMQQNE EAVNKSWGDL ESQLQRRADL VPNLVSTVKG AADFEQETLT RVIEARSKAS SVQLTPEMLS DPAAMAKFQS AQGELSSMLS RLMVVVERYP ELKANQNFRD LQNQLEGTEN RVSVARQRYN GAVETFNFSI RMFPNSLTNG IVLHLKPKEY FKGDASSQQV PQVEF
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