Gene Cphamn1_2026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2026 
Symbol 
ID6375719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2178366 
End bp2179148 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content54% 
IMG OID642684517 
Productprotein of unknown function DUF477 
Protein accessionYP_001960417 
Protein GI189500947 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.903181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGAGTA TTCTGAAAAG CCGGATATGG CTGGCTGCAG TCTTCAGCGG GTTGTGTTTC 
CTGCTGCAGC TTTCTGTGCC ACTGCCGCTT TATGCTCTTG AAGTTCCTGC ACTGACCGGT
AGAGTTAACG ACTATGCTTC GATGATTTCT CAGTCCGTAG AGCAGGAGAT TGATGACCGG
CTGGCCCGCC TCGAAGAGAC AGAGTCGACA CAGATCGTCG TGCTTACCAT CGATTCTCTT
GAAGGTGACC CACTCGAAGA GTATTCCATT CGGGTCGCCG AAGCGTGGGG GATAGGTCAG
AAATCGATTG ATAACGGGGC CCTGCTGCTG GTTGCAAAAA AAGAACGCAA GGCAAGGATC
GAAGCAGGCT ACGGATTGGA GGGGTCACTG ACCGATCTTG TCGCGGGCAG AATAGTCGAT
AATGACATCG TTCCTTTGTT CAGAAACAAT CGTTTTGACG AAGGTTTTGT CCGCGGTGTC
GATATGATGA TCGCTGCCGT TCAGGGTGAG TATGTCGGGG AGGAAAAAGC TGTCGCAGAA
GAGAGCGAAG GATCGCTTCT TCCGGTTCTT ATCATTCTGA TACTGATTAT CTATTTTTAC
AGTCAGGTGC CAAGGGGTGG AGGAGGTCAT GGTTCCGGTC CTTTGATATT TACCGGAGCT
CCCGGAGAGA GGGGTTTTTA TGGAGGCAGC CGCGGCGGCT TCGGCGGAGG CGGTTTCGGT
GGCGGTGGTT TCAGCGGGGG CGGCGGTGGT TTCGGTGGCG GTGGCGCTTC CGGAAGCTGG
TGA
 
Protein sequence
MRSILKSRIW LAAVFSGLCF LLQLSVPLPL YALEVPALTG RVNDYASMIS QSVEQEIDDR 
LARLEETEST QIVVLTIDSL EGDPLEEYSI RVAEAWGIGQ KSIDNGALLL VAKKERKARI
EAGYGLEGSL TDLVAGRIVD NDIVPLFRNN RFDEGFVRGV DMMIAAVQGE YVGEEKAVAE
ESEGSLLPVL IILILIIYFY SQVPRGGGGH GSGPLIFTGA PGERGFYGGS RGGFGGGGFG
GGGFSGGGGG FGGGGASGSW