Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2026 |
Symbol | |
ID | 6375719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2178366 |
End bp | 2179148 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642684517 |
Product | protein of unknown function DUF477 |
Protein accession | YP_001960417 |
Protein GI | 189500947 |
COG category | [R] General function prediction only |
COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.903181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGAGTA TTCTGAAAAG CCGGATATGG CTGGCTGCAG TCTTCAGCGG GTTGTGTTTC CTGCTGCAGC TTTCTGTGCC ACTGCCGCTT TATGCTCTTG AAGTTCCTGC ACTGACCGGT AGAGTTAACG ACTATGCTTC GATGATTTCT CAGTCCGTAG AGCAGGAGAT TGATGACCGG CTGGCCCGCC TCGAAGAGAC AGAGTCGACA CAGATCGTCG TGCTTACCAT CGATTCTCTT GAAGGTGACC CACTCGAAGA GTATTCCATT CGGGTCGCCG AAGCGTGGGG GATAGGTCAG AAATCGATTG ATAACGGGGC CCTGCTGCTG GTTGCAAAAA AAGAACGCAA GGCAAGGATC GAAGCAGGCT ACGGATTGGA GGGGTCACTG ACCGATCTTG TCGCGGGCAG AATAGTCGAT AATGACATCG TTCCTTTGTT CAGAAACAAT CGTTTTGACG AAGGTTTTGT CCGCGGTGTC GATATGATGA TCGCTGCCGT TCAGGGTGAG TATGTCGGGG AGGAAAAAGC TGTCGCAGAA GAGAGCGAAG GATCGCTTCT TCCGGTTCTT ATCATTCTGA TACTGATTAT CTATTTTTAC AGTCAGGTGC CAAGGGGTGG AGGAGGTCAT GGTTCCGGTC CTTTGATATT TACCGGAGCT CCCGGAGAGA GGGGTTTTTA TGGAGGCAGC CGCGGCGGCT TCGGCGGAGG CGGTTTCGGT GGCGGTGGTT TCAGCGGGGG CGGCGGTGGT TTCGGTGGCG GTGGCGCTTC CGGAAGCTGG TGA
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Protein sequence | MRSILKSRIW LAAVFSGLCF LLQLSVPLPL YALEVPALTG RVNDYASMIS QSVEQEIDDR LARLEETEST QIVVLTIDSL EGDPLEEYSI RVAEAWGIGQ KSIDNGALLL VAKKERKARI EAGYGLEGSL TDLVAGRIVD NDIVPLFRNN RFDEGFVRGV DMMIAAVQGE YVGEEKAVAE ESEGSLLPVL IILILIIYFY SQVPRGGGGH GSGPLIFTGA PGERGFYGGS RGGFGGGGFG GGGFSGGGGG FGGGGASGSW
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