| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2009 |
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| Symbol | |
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| ID | 6375702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2161257 |
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| End bp | 2163374 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642684500 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001960400 |
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| Protein GI | 189500930 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.333883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACC TCTGGGAAGA CACCGCTTGT AATGCTGTAG CGGAAGAGCT GGAAACTGTC
ACACAGCTGC CCCGGGAACT TGCCGAACTG GTATATTCCT CCCGCCTGCT TGGCAGGGAA
AACAGGCTTG TTATGCACGG AGGCGGTAAT ACGTCAGTTA AGTGCCAGCT TACCGATGTG
ATCGGCAACA AGGTAAATGT GCTTTTTATC AAGGGTAGCG GAGTGGATCT TGCCGATGTC
ACGGCGTATG ATTTTACTCC TGTCAGGATA GAACCTCTCC AGAGATTGCT GCAGATGATA
CTTTCCGGAG GAAATCTTAC TGACGAAGAT CTCAAGAGGT TCTCCAACCA GGAACTGAAA
AACTTTCTGT TTCTGAACCT TTTCAGCCTT ACCGATCATA TGGTGAAGAA CGGGCTGACG
CCTTCCATAG AGACCCTTTT ACACGCGTTT CTTCCGCATA AATACATCTT GCATACGCAT
TCTCAGGCAC TGCTGACGCT TACCAATCAG CCGGATGGCG AGAAGCTCAG CAAAGATGTG
CTTGGTGACA GGTTCGGTAT TGTTCCCTAC ATGAGGCCGG GACTGGAGCT GGCGCGTTCA
GCTGAAAAGG TCTATGCCGC TGACAGGGGC GTAACAGGAC TGGTGCTTCT GAAACACGGG
CTGGTAACCT TCGGGGAAAC TTCGAAGGAG GCGTATGATC TGATGATCGG GGCTGTTTCA
GATCTGGAGG AAAGAATTGG GCAACCCGGG CGGAAATCCT TTCCGTCGAT TGCATTGCCG
GGGGCGCTTT TTCCGCTCGA AAAAGTCGCT CCGGTAATAA GAGGGGCGTG TGTGACGGAA
AAAACGCCGG ACAGCAAGGA TTACGAGAGC TTTATTCTTG ATTTCAGGTC ATCTCCTGAG
ATTATGGAAT ATGTCAACAG CGCCGATCTG GAGCTTCTGG CCCGGAAGGG AAGCATGACG
CCCGATTTCA TTATCCGGAC AAAGAATATT CCTCTTGTTC TGCCTGTTCC CGATGCTTCT
GACCCCGAAG GGTTCAGAAA GCGCGTGCAT GAGGCTGTGA AAAACTATAC AAAAGAGTAT
ACGGCATATT TTGAACGTCA GCAGGCCGCA TCAGGTATTG AGGTGCAGAT GCTTGATCCG
TTACCGCGGG TTGTCCTTGT GCCCGGCCTC GGTCTGTTCG GTCTTGGCAA AACGCTCAGG
GATGCGCGTG TCAATGCGGA TATTGCCACA TCTACCGCTG AAGCAGTGCT TCAGGCTGAA
TCGATCGGTT GTTTCGAAAC GATCCCGGAA AACGAGGTAT TTGGAATTGA GTACTGGGAT
ATGGAGCAGG CCAAGGTAAA GAAAGTGCGT CATGATGTTT TTGCAGGCAA GGTTGCCATG
ATTACCGGCG CGGCAGGGGC TATAGGTTTC GCTACCGCCA GGGCTTTCAG GGAGAGAGGG
GCGGAAATAG CCATTCTTGA TTTTGACGGT GAAAGCCTTG AAAAATCCGT AGAAAAACTC
GGTCCGGATA CGCTTGGAAT CATTTGTGAC GTGACCGACC GTTCATCCGT TTCTGATGCC
TTCCGGAAGA TCTGCGAAAG ATTCGGCGGG ATTGATATCG TGGTGTCCAA TGTAGGCGCT
GCTCTTCAGG GCAGGATCGG CGAGGTTTCT GACGACGTTC TCAGAAAGAG CTTCGAACTT
AATTTTTTCT CTCATCAGTC GATTTCCCAG CAAGCGGTTG CTGTCATGAA GCTGCAGGGA
ATAGGCGGAA ATCTGTTGTA TAACGTTTCC AAACAGGCGG TAAATCCGGG TCCCGATTTC
GGGCCATATG GTCTTCCCAA AGCGGCGACT CTCTTTCTCC TTCGTCAGTA TGCTCTTGAT
CACGGCCGGG ACGGTATCCG GGCGAACGGT ATCAATGCAG ACAGGATCCG GAGCGGTTTG
CTTGACGAGA AAATGATAGC TGCCCGTTCA ACAGCAAGGG GGCTCAGCAC CAGCGAGTAT
ATGGCTGGTA ATCTTCTCAA GCTTGAGGTA ACCGCGGAAG ATGTCGCCGA TGCCTTTATT
CATCTCGCGC TGGAAAAAAA GACGACAGGT TCGATTACAA CGGTAGATGG CGGCAACATC
GCGGCCGCAC TCAGGTGA
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| Protein sequence | MQNLWEDTAC NAVAEELETV TQLPRELAEL VYSSRLLGRE NRLVMHGGGN TSVKCQLTDV
IGNKVNVLFI KGSGVDLADV TAYDFTPVRI EPLQRLLQMI LSGGNLTDED LKRFSNQELK
NFLFLNLFSL TDHMVKNGLT PSIETLLHAF LPHKYILHTH SQALLTLTNQ PDGEKLSKDV
LGDRFGIVPY MRPGLELARS AEKVYAADRG VTGLVLLKHG LVTFGETSKE AYDLMIGAVS
DLEERIGQPG RKSFPSIALP GALFPLEKVA PVIRGACVTE KTPDSKDYES FILDFRSSPE
IMEYVNSADL ELLARKGSMT PDFIIRTKNI PLVLPVPDAS DPEGFRKRVH EAVKNYTKEY
TAYFERQQAA SGIEVQMLDP LPRVVLVPGL GLFGLGKTLR DARVNADIAT STAEAVLQAE
SIGCFETIPE NEVFGIEYWD MEQAKVKKVR HDVFAGKVAM ITGAAGAIGF ATARAFRERG
AEIAILDFDG ESLEKSVEKL GPDTLGIICD VTDRSSVSDA FRKICERFGG IDIVVSNVGA
ALQGRIGEVS DDVLRKSFEL NFFSHQSISQ QAVAVMKLQG IGGNLLYNVS KQAVNPGPDF
GPYGLPKAAT LFLLRQYALD HGRDGIRANG INADRIRSGL LDEKMIAARS TARGLSTSEY
MAGNLLKLEV TAEDVADAFI HLALEKKTTG SITTVDGGNI AAALR
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