| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1996 |
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| Symbol | |
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| ID | 6375689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2145946 |
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| End bp | 2147301 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642684488 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_001960388 |
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| Protein GI | 189500918 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.320678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0920131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATG TCGGTAAAAA AAAACGTGTT TTTGCGATAA CGCTTGGTTG TAAACTTAAC
TATGCGGAAA CATCTTCTAT ACTGGCCCGT TTCGTTAAGA ATGGCTGGGA GATTGCAGAT
AGTGACGATA TCCCTGACCT GATAATAATA CATACCTGCG CGGTTACCAG CCAGGCGGGG
CAGAAGTCAA GGCAGCAGAT CAGGAAAATG ATAAAAAAAT ACCCTCTAAG CAGGATAGCG
GTTACGGGCT GCTATGCCCA GATGTATCCT GATAGCGTTG AAACTATTGA TGGAGTACAT
GTTATTCTCG GTGTCAGGGA AAAGTATATT CCGGAAAAGT ATATAAAAGA TGTGCAGGAA
GCCGTCTATA GAGAAGTTGC TTCGCCGGAG ACCATAAAGG ATGCCGAGCC GGCCCATTCA
CTGATAGAAA AGAGGGAGAA GGGGAGGACG AGGGCATTTT TGAAAATCCA GGATGGATGT
GACTATGCCT GCGCATACTG TACCATTCCG CTTGCACGAG GAAAGTCCCG TTCCGTACCG
CTTGAAACGG TGCTGGCCGG TGCTGTCAGG CTCGCTGAAG CAGGGTATCG TGAAATCGTT
TTGACCGGAG TGAACATCGC GGATTACCGG AGTGGCCGCA ATACTTTTGT CGATCTCCTG
CTTGAGCTGG AATCAGTCGA TGTGAGCAGG ATCAGAATCA GCTCCATAGA ACCGGATATA
CTCAGTGACA GACTGATAGA TACGGTCGCG TCGTCTTCAA AGATCATGCC GCATTTTCAT
CTGCCGCTTC AATCAGGTTC TGATGCTATT CTCGCGGCAA TGCGACGTCG TTATTCAGCG
ACAGGATACA GGGAGCGATT GATGAAGGCG GTGAGCGCCA TTCCGCACTG TGCTGTCGGC
GCTGACGTCA TAACCGGATA TCCGGGAGAG ACAGAATCTG ATTTTATGGC GACGTTCAGA
TTGTTGGAAA GCATACCGGC AGCCTATCTG CATGTTTTCA CCTGCTCGCT GAGGCCGGGC
ACACAACTCT CCGGACAGGT GTCTTCCGGA CTTCGTCAGA GCGTCTCATC GGCAGTATCA
CGTGAAAGGA GCCGCCTGCT TCTTGATCTC GCTGAAAAGA AGCAGCGGGA GTATGCATCC
TGTTACCTGG GAAAAACGCT TGATGTGCTT TTCGAGGAAC ACCGTGGAGT GAAAGGCGAA
AAGGGCACTG TTTCCGGATA TTCTCCGAAC TATCTCAGGG TTCGGTGTCA TACGGAGAGT
TCCGCGCTAG CGACAGATAT TGTCGGCAGA GAGCGTAGGG TCATTATAGA AAATATGAAC
GAAGATTTGA TTTTAGAAGG CAGATTTGTA ACTTAA
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| Protein sequence | MDNVGKKKRV FAITLGCKLN YAETSSILAR FVKNGWEIAD SDDIPDLIII HTCAVTSQAG
QKSRQQIRKM IKKYPLSRIA VTGCYAQMYP DSVETIDGVH VILGVREKYI PEKYIKDVQE
AVYREVASPE TIKDAEPAHS LIEKREKGRT RAFLKIQDGC DYACAYCTIP LARGKSRSVP
LETVLAGAVR LAEAGYREIV LTGVNIADYR SGRNTFVDLL LELESVDVSR IRISSIEPDI
LSDRLIDTVA SSSKIMPHFH LPLQSGSDAI LAAMRRRYSA TGYRERLMKA VSAIPHCAVG
ADVITGYPGE TESDFMATFR LLESIPAAYL HVFTCSLRPG TQLSGQVSSG LRQSVSSAVS
RERSRLLLDL AEKKQREYAS CYLGKTLDVL FEEHRGVKGE KGTVSGYSPN YLRVRCHTES
SALATDIVGR ERRVIIENMN EDLILEGRFV T
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