Gene Cphamn1_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1975 
Symbol 
ID6375667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2120445 
End bp2120975 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content56% 
IMG OID642684466 
Productputative glycosyl transferase, family 4 
Protein accessionYP_001960367 
Protein GI189500897 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0974645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTATC CGCCCATCAT CAGTGCTGGA GTATCGGGCG CACTGGTGCT GAGCAAGTCT 
TGGCACGGCA AGCGCTCATT CGACGGTCAT GACGGGATCC AGATGCTCAT CGCAGCCGTT
CCGGCGTTCG CCGCAGGGCT GACGGAGGAT TTTATCAAAC GCGTGGGTGT GAGTGAGCGG
CTTCTTGCAA CCATGCTCAG CGGACTTCTC GCTGCCATGC TCACCGGGTA TGCCATTACC
CGCAGCGACA TTCCCGCTCT TGACGCCGTT TTTTCGTTCA TGTCGTTCTC TGTCGCGTTC
ACAGCATTTG CGGTGGGCGG GGCAGCAAAT GGCGTAAACG TCATCGACGG CTTCAACGGA
CTCGCAGGCG GTGTGCTGAT GATCTGCTTC ACGGTGCTCT GCCTCATTGC TCTCTGGGTC
GGTGGCTTTG TGCTTGTGCA GATCTGTTTT CTAATGACCT TATCGGTGGC CGGATTCATG
GCGGTGAAGA AGGAGAAGAC GAAGAAAACC AATAAGAGAG GACGTTGGTA A
 
Protein sequence
MIYPPIISAG VSGALVLSKS WHGKRSFDGH DGIQMLIAAV PAFAAGLTED FIKRVGVSER 
LLATMLSGLL AAMLTGYAIT RSDIPALDAV FSFMSFSVAF TAFAVGGAAN GVNVIDGFNG
LAGGVLMICF TVLCLIALWV GGFVLVQICF LMTLSVAGFM AVKKEKTKKT NKRGRW