| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1972 |
|---|
| Symbol | |
|---|
| ID | 6375664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2117526 |
|---|
| End bp | 2117921 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642684463 |
|---|
| Product | DNA polymerase beta domain protein region |
|---|
| Protein accession | YP_001960364 |
|---|
| Protein GI | 189500894 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1669] Predicted nucleotidyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.18731 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGG AGATCGATCA GCAGATCAGA GCGGTGCTTC AAGGCCACCC CGGAATTATT
CTTGCGATTC TTTTCGGTTC CATGGCCAAA GGAACGGCAG GGCCCGATAG TGACCTCGAC
CTTGCGGTCT ATGCCGACCA GCCGATCACA GCAGAAGAAA AAATGCAGCT GATCGAAGAT
CTTGCACTGC AGATCGGTCG TCCTGTGGAC CTGGTAGATA TCAAGACGGC AGGCTTGCCC
GTCATGGCGC AGATTTTCTC CAGAGGCAGA AGGATCCTCG GTTCAAACTC GCTCTATGCG
ACACTGCTTA CCCGCTACCA GATCGACAGC GCTGATTTTA TGCCCATTCG GCAGAGGGTG
CTGGAAGAGA GGAGGAAGAG ATGGATTGGA GTCTGA
|
|---|
| Protein sequence | MTQEIDQQIR AVLQGHPGII LAILFGSMAK GTAGPDSDLD LAVYADQPIT AEEKMQLIED
LALQIGRPVD LVDIKTAGLP VMAQIFSRGR RILGSNSLYA TLLTRYQIDS ADFMPIRQRV
LEERRKRWIG V
|
|---|
| |