Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1968 |
Symbol | |
ID | 6375660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 2114442 |
End bp | 2115842 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642684459 |
Product | hypothetical protein |
Protein accession | YP_001960360 |
Protein GI | 189500890 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.360156 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAAAG ATAAGACGAT TAAGGGTAAA AAAGAACAGC AGATTTGCGC CATTTTGCCG AGCGACGACC AACTGACCGG CAGGGCTGGC TTGAGCGTCT TCGCACTGTA CCTGCGCAAC ATAGGGCTGT TTCCGAATTA TGACCGCCTG TTCGGTAAAG TGCGGAAGAA TGGCAAGCGC CTGGCGGTCA CCGAGATGTT CGTGCAGATT TTGAGCTTCT TCATGGATGG TACGAGCCGC CATCTGAACT GGTTCGATCA TCTTGCCGCT GATGATGCCT ATGCCGGCCT GCTCGGAACC GGTCGATTGG CCTCGTCGCA TGCCGTCAAG CGTTTTATCG GGGCTATCTC CTTCTGTCGG ATTTACCTGT TCCGGAGATT GCTGCAGGAT GTGTTTCTCT GGCGCCTGAA GCACACCAGG CCGGAAGTGA TCATGCTCGG CATTGATACG ACGGTTCTGG ACAATGACGA TGCCGAGAAG CGCCATGGGG TGCAACCCAC ATACAAGAAG GTCAAAGGGT TCCAGCCCTT GCAGATGAAC TGGGGCAGGT ATGTGGTGGA CGCGGTGTTC CGTGGAGGAA AGAAACACTC GAACCACGGC AATACGGTCA ATGAGATGCT GGTGCATATG GTAAGGAAAA TCCGGAACGC TTACAGGGAA GAGGTTCCGA TCATTGTGCG CATGGACGCC GGGTTCTTCG ACGACGAAGT ATTCAAGACC TGTGAGCAAC TGCAAATCGG TTATCTGTGC GGCGGCAAGC AGTACAGCAA TGTTCTTGAT GAGGTTGCCG ATGCGGTCGA CTGGCAATCG TTCAAAAAAG TCGAAACTGA CTCAAAAAGC TGGATGTACA CCGAATTCAT GAGCAGACAA AAGAAATGGA AGAAAGAGCG CCGGACGATC TTCAGTACGC TCTGGGAAGA GGACGGGCAG TATCTGCTGC AAGGCATATG TCGTGATTCC GTCATCATCA CCAATATGGG CATGGGTGAA AAAGAATCGA TGAGCAACTT GCCAAGATCG GCCGCGAGGA CTTGCTCGAC GCCGGAAAGC TTCTTGGCCT CTACCACGAA AGGGGAACAG GACGAACTGA CCAACCGTGC ATTGAAGACC TTCGGCCATG AGCAGCTACC GTTCAAGCGA TTCACTGCAA ACTCGGCCTG GTACTACCTG ATGGTGCTTG GCAACAACCT CTTTGAGGCC TTCAAGGAAG ACGTGACCGA AGCGGTCATT CCGGTGTCGG CTTATGCCGA CACCTTCCGC CGCAGGTTCA TCGATACAGC CGGAAAACTG GTGCGCCATG CCGGGAAGCT GGTCATGAAA GTCAACAAGG TTGACTATGT TCGCCTGAAG TTCGACCAGC TGTATGAGAA ATGCCGTGTC GGACTTCCGC GACTGGAATA A
|
Protein sequence | MAKDKTIKGK KEQQICAILP SDDQLTGRAG LSVFALYLRN IGLFPNYDRL FGKVRKNGKR LAVTEMFVQI LSFFMDGTSR HLNWFDHLAA DDAYAGLLGT GRLASSHAVK RFIGAISFCR IYLFRRLLQD VFLWRLKHTR PEVIMLGIDT TVLDNDDAEK RHGVQPTYKK VKGFQPLQMN WGRYVVDAVF RGGKKHSNHG NTVNEMLVHM VRKIRNAYRE EVPIIVRMDA GFFDDEVFKT CEQLQIGYLC GGKQYSNVLD EVADAVDWQS FKKVETDSKS WMYTEFMSRQ KKWKKERRTI FSTLWEEDGQ YLLQGICRDS VIITNMGMGE KESMSNLPRS AARTCSTPES FLASTTKGEQ DELTNRALKT FGHEQLPFKR FTANSAWYYL MVLGNNLFEA FKEDVTEAVI PVSAYADTFR RRFIDTAGKL VRHAGKLVMK VNKVDYVRLK FDQLYEKCRV GLPRLE
|
| |