| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1930 |
|---|
| Symbol | |
|---|
| ID | 6375622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2095848 |
|---|
| End bp | 2097017 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642684424 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_001960325 |
|---|
| Protein GI | 189500855 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.73975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.367302 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTTC GTTACCCTCT TGCATCCTCT ACATGGGGAA CCGAAGAAAA AGAAGCAATG
TATCGTGTGA TCGACTCCGG AATGTTCACC ATGGGTCCGG AAGTTGCCAC TTTCGAACAG
CAATTCGCAC AGTATACAGG AAGTAACCAT TGTGTTATGG TGAATTCGGG TTCATCTGCA
AACCTGCTTA TGGTTGCAGC CTTGTTTTAC CGAAAGGATA ACCCCTTAAA GCGAGGAGAT
GAGGTTATTG TTCCTGCCGT TTCATGGAGT ACAACCTATT ATCCTCTTTA TCAATATGGG
TTAAAGATCA AGTTTGTCGA TATAGATCTG GAAACCTTGA ATTTCGATCT TGATCAGCTT
GAAGCTGCCG TTACAGCGAA AACTCGTTTG ATCATGGCGG TCAACCTTCT TGGAAACCCT
AACGATTTTA ACAGGATATT TGAGATCATA GAAGGTAAGG ATGTTATCCT TATTGAGGAT
AACTGTGAGG CTATGGGTGC TTCCTATAAC GGGAAAATGG CAGGGACATT CGGAGTTATG
GGGAGTTTTA GCACCTTTTT TAGCCATCAC ATCTCGACAA TGGAAGGGGG GATGATCGTT
ACTGATGATG AGGAGCTATA TCATATTCTT CTTTCTTTGC GTGCTCATGG GTGGACGAGG
AATCTGCCAA AACATAATTT TGTCTGCGGG GAAAAAAGCG ATGATCCTTT TGAGGAGTCA
TTCAGATTTG TTTTGCCTGG TTACAATGTT CGCCCTTTGG AGCTTGAAGG AGCAATCGGA
ATAGAGCAGT TGAAAAAATT ACCTCAGTTT ATTGAAAAAA GAAGAGAGAA TGCTCTGTTG
TTTCAGGATG CTATGAATAG CCATCCTGAT TTGATAATTC AAAAAGAAAT AGGGAAAAGT
AGCTGGTTTG GATTCAGTAT TATTATTCGC AAAAAATCAT CCTTTACTAG AAAAGAATTG
ATTGATAGGC TTGATGCTTA TGGTATAGAG TGCAGGCCTA TTGTTGCTGG TAATTTTGTA
AAAAATGAGG TGATTGGGGA CTTGGATTAT GAAATACCTT TTGAGTTAAA GAACGCAAAT
TCTCTTGATG AAAACGGCTT TTTTATAGGT AATCATCATT ATTTAATGGA TGGTTCAATT
GATCTGCTGA AAAAAAGTGT TTATGAATAA
|
|---|
| Protein sequence | MSVRYPLASS TWGTEEKEAM YRVIDSGMFT MGPEVATFEQ QFAQYTGSNH CVMVNSGSSA
NLLMVAALFY RKDNPLKRGD EVIVPAVSWS TTYYPLYQYG LKIKFVDIDL ETLNFDLDQL
EAAVTAKTRL IMAVNLLGNP NDFNRIFEII EGKDVILIED NCEAMGASYN GKMAGTFGVM
GSFSTFFSHH ISTMEGGMIV TDDEELYHIL LSLRAHGWTR NLPKHNFVCG EKSDDPFEES
FRFVLPGYNV RPLELEGAIG IEQLKKLPQF IEKRRENALL FQDAMNSHPD LIIQKEIGKS
SWFGFSIIIR KKSSFTRKEL IDRLDAYGIE CRPIVAGNFV KNEVIGDLDY EIPFELKNAN
SLDENGFFIG NHHYLMDGSI DLLKKSVYE
|
|---|
| |