Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1928 |
Symbol | |
ID | 6375620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2093274 |
End bp | 2094521 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642684422 |
Product | O-antigen polymerase |
Protein accession | YP_001960323 |
Protein GI | 189500853 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0538104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.352319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATAA TTAGTATATC AAATAAAAGG GATAAGTCGG ACTTTAAGAT TTATAGCATA GCAAGGGTAT CGATATATCT TTTATTGTTT GGTGGACTTA TTAATAATGT TTTTCAGGTA GGTGTGCAGT ATTTATATTT AGTGGTATCC TTAATGATGA TATTGCCCTT TGTTCTGAAT AAGAGTATTG ATGTGTTGAT GGGGGTTTAT TTGCTTGTTG TTATTCTTTT GTTTGTTTAT TCCTTTTTTT TAACTGAAGG CTTAAGTTAT AAGTATTATT CCTCATTCGT TTATTATGTT GCAATTCCTT TTGCTTATGG AAGGGGGAAT TTATTTGTAA ATCAGTATTA TTATAATAAG CTGCTATATG GATTGTTGGT TGTTGTGATC CCTAATGCAA TTGTTGTTTT AATGCAGAGT AATGGGTTGT ACGTAAACCT GTTTCCTGTT GAATATACAA GAATATCTGA TGTTGTATAC GTAAGATGTA CAGGAGTGTT AGGAGGCTCT TTAATTAATG GTCTTGTTTC TGCTTTATGC TTAATAATTA TTATCTACAG GGCGCTTGAA GAAAAAAAAT ATAAGACAAT TGATTTGCTG TTGTTTGTGT TGTCTTTATA TGCTTTATTG CTTTCATATT CGAGGGGCGC ATATGTACTT TTGATGGTTG CTGTGTTTGT TATTGTATAT AAGATGCGGA TTTTAAGTTT TAAGGGCGTA AAGAGACCTT ATGTTGTATT TTTTATTGTT TTATTTGTTG CTGTTATTCT GTTTTACAAT GACGTCGTCC TGGAAAGAAT TTATTCTATA TTTGATTTCT CGCAGGGTGG TAATTTGCTT AGATATGATT ATTGGCTCAG ATCGCTACAG GTTTTTAAGG ATAATATGAT TCTTGGGGCA GGTTTAGGTA TGACAAGTAC CGTTGGTGGT AGCGATTCCA GTATGGTGAT TGCTGGTGAC GCTAGCATTG CTGAGAGTTA TTATTTAAAA TTGATGGTTG AGGGTGGAAT AATGTTATTA ATATCTTTTT TGCCTTTAGT CTTTTACGGT ATCAAGAAGT CACTTAAAGA GAAAAATGAG TTGCTCTTTT CTGCTATCTT TATAGCTATT ACCATAGAAA CTTTTATAAT GCCATCTTTA GAGTCTCCAT TGATTTCAAT TATATATTGG CTTTGTTGGG GGGCGCTAAT GAAAAGAAGC TTTTCTGAAT TACGAAAGAG ATATATGGGT TTTGCTTTTA AGGATTGA
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Protein sequence | MAIISISNKR DKSDFKIYSI ARVSIYLLLF GGLINNVFQV GVQYLYLVVS LMMILPFVLN KSIDVLMGVY LLVVILLFVY SFFLTEGLSY KYYSSFVYYV AIPFAYGRGN LFVNQYYYNK LLYGLLVVVI PNAIVVLMQS NGLYVNLFPV EYTRISDVVY VRCTGVLGGS LINGLVSALC LIIIIYRALE EKKYKTIDLL LFVLSLYALL LSYSRGAYVL LMVAVFVIVY KMRILSFKGV KRPYVVFFIV LFVAVILFYN DVVLERIYSI FDFSQGGNLL RYDYWLRSLQ VFKDNMILGA GLGMTSTVGG SDSSMVIAGD ASIAESYYLK LMVEGGIMLL ISFLPLVFYG IKKSLKEKNE LLFSAIFIAI TIETFIMPSL ESPLISIIYW LCWGALMKRS FSELRKRYMG FAFKD
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