Gene Cphamn1_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1928 
Symbol 
ID6375620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2093274 
End bp2094521 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content33% 
IMG OID642684422 
ProductO-antigen polymerase 
Protein accessionYP_001960323 
Protein GI189500853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0538104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.352319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATAA TTAGTATATC AAATAAAAGG GATAAGTCGG ACTTTAAGAT TTATAGCATA 
GCAAGGGTAT CGATATATCT TTTATTGTTT GGTGGACTTA TTAATAATGT TTTTCAGGTA
GGTGTGCAGT ATTTATATTT AGTGGTATCC TTAATGATGA TATTGCCCTT TGTTCTGAAT
AAGAGTATTG ATGTGTTGAT GGGGGTTTAT TTGCTTGTTG TTATTCTTTT GTTTGTTTAT
TCCTTTTTTT TAACTGAAGG CTTAAGTTAT AAGTATTATT CCTCATTCGT TTATTATGTT
GCAATTCCTT TTGCTTATGG AAGGGGGAAT TTATTTGTAA ATCAGTATTA TTATAATAAG
CTGCTATATG GATTGTTGGT TGTTGTGATC CCTAATGCAA TTGTTGTTTT AATGCAGAGT
AATGGGTTGT ACGTAAACCT GTTTCCTGTT GAATATACAA GAATATCTGA TGTTGTATAC
GTAAGATGTA CAGGAGTGTT AGGAGGCTCT TTAATTAATG GTCTTGTTTC TGCTTTATGC
TTAATAATTA TTATCTACAG GGCGCTTGAA GAAAAAAAAT ATAAGACAAT TGATTTGCTG
TTGTTTGTGT TGTCTTTATA TGCTTTATTG CTTTCATATT CGAGGGGCGC ATATGTACTT
TTGATGGTTG CTGTGTTTGT TATTGTATAT AAGATGCGGA TTTTAAGTTT TAAGGGCGTA
AAGAGACCTT ATGTTGTATT TTTTATTGTT TTATTTGTTG CTGTTATTCT GTTTTACAAT
GACGTCGTCC TGGAAAGAAT TTATTCTATA TTTGATTTCT CGCAGGGTGG TAATTTGCTT
AGATATGATT ATTGGCTCAG ATCGCTACAG GTTTTTAAGG ATAATATGAT TCTTGGGGCA
GGTTTAGGTA TGACAAGTAC CGTTGGTGGT AGCGATTCCA GTATGGTGAT TGCTGGTGAC
GCTAGCATTG CTGAGAGTTA TTATTTAAAA TTGATGGTTG AGGGTGGAAT AATGTTATTA
ATATCTTTTT TGCCTTTAGT CTTTTACGGT ATCAAGAAGT CACTTAAAGA GAAAAATGAG
TTGCTCTTTT CTGCTATCTT TATAGCTATT ACCATAGAAA CTTTTATAAT GCCATCTTTA
GAGTCTCCAT TGATTTCAAT TATATATTGG CTTTGTTGGG GGGCGCTAAT GAAAAGAAGC
TTTTCTGAAT TACGAAAGAG ATATATGGGT TTTGCTTTTA AGGATTGA
 
Protein sequence
MAIISISNKR DKSDFKIYSI ARVSIYLLLF GGLINNVFQV GVQYLYLVVS LMMILPFVLN 
KSIDVLMGVY LLVVILLFVY SFFLTEGLSY KYYSSFVYYV AIPFAYGRGN LFVNQYYYNK
LLYGLLVVVI PNAIVVLMQS NGLYVNLFPV EYTRISDVVY VRCTGVLGGS LINGLVSALC
LIIIIYRALE EKKYKTIDLL LFVLSLYALL LSYSRGAYVL LMVAVFVIVY KMRILSFKGV
KRPYVVFFIV LFVAVILFYN DVVLERIYSI FDFSQGGNLL RYDYWLRSLQ VFKDNMILGA
GLGMTSTVGG SDSSMVIAGD ASIAESYYLK LMVEGGIMLL ISFLPLVFYG IKKSLKEKNE
LLFSAIFIAI TIETFIMPSL ESPLISIIYW LCWGALMKRS FSELRKRYMG FAFKD