| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1927 |
|---|
| Symbol | |
|---|
| ID | 6375619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2092169 |
|---|
| End bp | 2093035 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642684421 |
|---|
| Product | cobalamin B12-binding domain protein |
|---|
| Protein accession | YP_001960322 |
|---|
| Protein GI | 189500852 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.2434 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.204325 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGAATA TGTTAAAGGG CTTTGGGACA GATGAAAAAA GATTTCCACT TGGTCTTGGC
TCACTTGCTA CAATTCTTAG TAAAGCAGGG CATAATGTTG ATCTTGTTGA TAGATATGCC
TTGCCGGGCG AAAAGATCGG TAGTCTAAGT AAATATGATT TTATAGGTGT GTATGCAAGT
ACGCCGTGCT ATGATGACGC CTTGGCAGTA CTTGAATATA TAAGAAAGAG TGGTTTTAAG
GGAAAGATAG CTGTTGGCGG CCCTCATGCA ACTGTTTACC CAAATACTAT ACCCGATTAT
GTCGATTATG TTGTTCAGGG TGAGGGTGAA TATGTTATTA ATGATTTAGT GAAGGGTGTA
TATGATTCGG GCGTTATATT GAAGACGCAA AGAATAGAAA ATCTTGATGA ACTGCCTATG
GTTGATTATG ATATATATCT TAAGAAAGAA CGACCTTATC ATTTAAATTT TGCATTTTCA
GACGTTTCTC CTGTCTTTAA TATGAATACT TCAAGAAGTT GCCCATTTCA TTGCAGCTTT
TGTGGCGTTC AAAAAATATG GGGTAAATTA TGGACTGCAC AGTCTGCAGA AAGAGTTGTA
GAAGAGATTG TGTATTTGAA GCAGAAATAT GGCATTAGAG GTGTATACTT TAGAGAAGAT
TTCTTTTTGG TTAATAAAAA ACGCGTTTAT GATATTTGTG AGTTGCTTAT AAAAAAACAG
GTAAATGTTA AATGGGCCTG TGAAACAAGA GTTGATAAAA TGGATGAGGA TATAATATCT
CTAATGGCAA AAAGTGGATG TATTGGTTTT TATGTAGGAG CTGAAAGTGG TAGTCAGAAA
ATGTTAAACT ATTATAACCT AAGTTGA
|
|---|
| Protein sequence | MKNMLKGFGT DEKRFPLGLG SLATILSKAG HNVDLVDRYA LPGEKIGSLS KYDFIGVYAS
TPCYDDALAV LEYIRKSGFK GKIAVGGPHA TVYPNTIPDY VDYVVQGEGE YVINDLVKGV
YDSGVILKTQ RIENLDELPM VDYDIYLKKE RPYHLNFAFS DVSPVFNMNT SRSCPFHCSF
CGVQKIWGKL WTAQSAERVV EEIVYLKQKY GIRGVYFRED FFLVNKKRVY DICELLIKKQ
VNVKWACETR VDKMDEDIIS LMAKSGCIGF YVGAESGSQK MLNYYNLS
|
|---|
| |