Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1925 |
Symbol | |
ID | 6375617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2089038 |
End bp | 2089826 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642684419 |
Product | glycosyl transferase family 2 |
Protein accession | YP_001960320 |
Protein GI | 189500850 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0901207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGCA TATATTTTAG TGTCATAATA CCTTCTTATG AAAATATTAT CCTCTTTGAG AAGGCCTTGT TGTCTGTGCT TAAACAAGAT CATATTTATT ATGAGGTTAT TGTTGTAGAT GATTCTGCAA GTGACCAAAT AAAGGAGTGT TTGTTTAAAG TAAACAATGA TAGGATTAAA TATTATAAAA ATGTCCCGCC AAGGGGAGCT GTGAAAAACT GGAATTACGG TATCTCATTA GCTGAGGGGG ATTATGTTAT TTTATTGCAT CATGATGAAT CCTTTATAAG GAAAGACTAT TTAAGGAGGT GCTGTGAGTG CATTTGTAAA ACAGATTGTG AGGTTTTAAT ATCTAATGTT TTTGTGGATT TTAATGAGGA AGTAAAAAGA AGTAATGAGA AGAGCGTATG GTTGAAAAAA ATTATATGCA ATTATTTTCC TGATGTATTA TATCTTTTTA ATTTTATTGG TCCTACAGCA ACTGTTAGCG TTAAGAGAAA ATTTATAAAG AATTTTGATG AAAGTCTTGT CCTTATGGTT GATGTGGATT GGTATATAAA AATTATAAAG GGAAGAAGCC TAGGGTTTAT AGAAGAAGGT GGTATTTATT CAATATTTGG ACATGAAAGC CAAATATCTA TGAATATAGA TATGGAGTTG GTGAGAAAAA AAGACGAAAT GTATCTCATG GGGCAACGAA AATATATGGG CGTAGCTTTT TGGGTAAGAT GGAGGCTATT AATCCTTTTC GGAAGGCAGA GTCTGATAAA AAAAATAATA TGGAGATAG
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Protein sequence | MNSIYFSVII PSYENIILFE KALLSVLKQD HIYYEVIVVD DSASDQIKEC LFKVNNDRIK YYKNVPPRGA VKNWNYGISL AEGDYVILLH HDESFIRKDY LRRCCECICK TDCEVLISNV FVDFNEEVKR SNEKSVWLKK IICNYFPDVL YLFNFIGPTA TVSVKRKFIK NFDESLVLMV DVDWYIKIIK GRSLGFIEEG GIYSIFGHES QISMNIDMEL VRKKDEMYLM GQRKYMGVAF WVRWRLLILF GRQSLIKKII WR
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