Gene Cphamn1_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1925 
Symbol 
ID6375617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2089038 
End bp2089826 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content32% 
IMG OID642684419 
Productglycosyl transferase family 2 
Protein accessionYP_001960320 
Protein GI189500850 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0901207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCA TATATTTTAG TGTCATAATA CCTTCTTATG AAAATATTAT CCTCTTTGAG 
AAGGCCTTGT TGTCTGTGCT TAAACAAGAT CATATTTATT ATGAGGTTAT TGTTGTAGAT
GATTCTGCAA GTGACCAAAT AAAGGAGTGT TTGTTTAAAG TAAACAATGA TAGGATTAAA
TATTATAAAA ATGTCCCGCC AAGGGGAGCT GTGAAAAACT GGAATTACGG TATCTCATTA
GCTGAGGGGG ATTATGTTAT TTTATTGCAT CATGATGAAT CCTTTATAAG GAAAGACTAT
TTAAGGAGGT GCTGTGAGTG CATTTGTAAA ACAGATTGTG AGGTTTTAAT ATCTAATGTT
TTTGTGGATT TTAATGAGGA AGTAAAAAGA AGTAATGAGA AGAGCGTATG GTTGAAAAAA
ATTATATGCA ATTATTTTCC TGATGTATTA TATCTTTTTA ATTTTATTGG TCCTACAGCA
ACTGTTAGCG TTAAGAGAAA ATTTATAAAG AATTTTGATG AAAGTCTTGT CCTTATGGTT
GATGTGGATT GGTATATAAA AATTATAAAG GGAAGAAGCC TAGGGTTTAT AGAAGAAGGT
GGTATTTATT CAATATTTGG ACATGAAAGC CAAATATCTA TGAATATAGA TATGGAGTTG
GTGAGAAAAA AAGACGAAAT GTATCTCATG GGGCAACGAA AATATATGGG CGTAGCTTTT
TGGGTAAGAT GGAGGCTATT AATCCTTTTC GGAAGGCAGA GTCTGATAAA AAAAATAATA
TGGAGATAG
 
Protein sequence
MNSIYFSVII PSYENIILFE KALLSVLKQD HIYYEVIVVD DSASDQIKEC LFKVNNDRIK 
YYKNVPPRGA VKNWNYGISL AEGDYVILLH HDESFIRKDY LRRCCECICK TDCEVLISNV
FVDFNEEVKR SNEKSVWLKK IICNYFPDVL YLFNFIGPTA TVSVKRKFIK NFDESLVLMV
DVDWYIKIIK GRSLGFIEEG GIYSIFGHES QISMNIDMEL VRKKDEMYLM GQRKYMGVAF
WVRWRLLILF GRQSLIKKII WR