Gene Cphamn1_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1923 
Symbol 
ID6375615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2087195 
End bp2088016 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content33% 
IMG OID642684417 
Productglycosyl transferase family 2 
Protein accessionYP_001960318 
Protein GI189500848 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0969327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGATG ACAAAGTGAA GTTATCAGTG CTGATGTCTG TATATGAAAA AGAAGATCCG 
ATATATTTTA GTGATTCTTT AAGAAGTTTA TCTTCGCAGA CAAGGATGGC TGATAATGTT
GTGATAGTAG AGGATGGAAG GATAAATGAT GAACTATCTG ATATTATTAA TGCTTATAGG
GCTAAATTGA ATATAACTTC TGTAAAACTC AAATTAAACA GAGGTTTAGC CGAGGCTCTT
AATGAGGGTT TAAAGTATTG TGATAGTGAA TATGTTGCGA GAATGGATTC AGATGATATA
TCCCATAAAA CGAGATTTGA ACGTCAAATA GAGTTTATGG AGAAAAATAA TGATGTCTCT
GTTTGCGGGG CATATATAGA GGAAATTACA GGTGCTGGTA GAAAAATATC TGTAAGGACG
GTGCCGTTAA CGCATAATGA AATCTGCAGA TTTGCAAAAA CACGCAGCCC TATGAGCCAT
CCTGTAGTAA TGTTTAGAAA GAATGATGTT CTGAATGTTG GAGGGTATCG TTTATTTAGA
AAATCACAGG ATATGGCTTT ATGGTCACTT ATGATAATGA GAGGATATCG CTTCGCCAAT
ATTGGAGAGC CGTTATTAAA AATGAGAATA TGTGGTGATA TTAAGAAAAA AAGAGGCCTC
TCATATTACA AAGAGGAAGT GAAGGTTTTA AAGTATCAAA AGGATATTGG ATTTATAAAT
ACACAGACAT ATCTAAAAAA TGTCTTAGTT AGAAGAATGT TAAGGATGAG CCCTGATTTT
ATTATTAATA TTCTGTATAG ATTTAGGGAT TTGTACAAAT AA
 
Protein sequence
MEDDKVKLSV LMSVYEKEDP IYFSDSLRSL SSQTRMADNV VIVEDGRIND ELSDIINAYR 
AKLNITSVKL KLNRGLAEAL NEGLKYCDSE YVARMDSDDI SHKTRFERQI EFMEKNNDVS
VCGAYIEEIT GAGRKISVRT VPLTHNEICR FAKTRSPMSH PVVMFRKNDV LNVGGYRLFR
KSQDMALWSL MIMRGYRFAN IGEPLLKMRI CGDIKKKRGL SYYKEEVKVL KYQKDIGFIN
TQTYLKNVLV RRMLRMSPDF IINILYRFRD LYK