Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1923 |
Symbol | |
ID | 6375615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2087195 |
End bp | 2088016 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642684417 |
Product | glycosyl transferase family 2 |
Protein accession | YP_001960318 |
Protein GI | 189500848 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0969327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGATG ACAAAGTGAA GTTATCAGTG CTGATGTCTG TATATGAAAA AGAAGATCCG ATATATTTTA GTGATTCTTT AAGAAGTTTA TCTTCGCAGA CAAGGATGGC TGATAATGTT GTGATAGTAG AGGATGGAAG GATAAATGAT GAACTATCTG ATATTATTAA TGCTTATAGG GCTAAATTGA ATATAACTTC TGTAAAACTC AAATTAAACA GAGGTTTAGC CGAGGCTCTT AATGAGGGTT TAAAGTATTG TGATAGTGAA TATGTTGCGA GAATGGATTC AGATGATATA TCCCATAAAA CGAGATTTGA ACGTCAAATA GAGTTTATGG AGAAAAATAA TGATGTCTCT GTTTGCGGGG CATATATAGA GGAAATTACA GGTGCTGGTA GAAAAATATC TGTAAGGACG GTGCCGTTAA CGCATAATGA AATCTGCAGA TTTGCAAAAA CACGCAGCCC TATGAGCCAT CCTGTAGTAA TGTTTAGAAA GAATGATGTT CTGAATGTTG GAGGGTATCG TTTATTTAGA AAATCACAGG ATATGGCTTT ATGGTCACTT ATGATAATGA GAGGATATCG CTTCGCCAAT ATTGGAGAGC CGTTATTAAA AATGAGAATA TGTGGTGATA TTAAGAAAAA AAGAGGCCTC TCATATTACA AAGAGGAAGT GAAGGTTTTA AAGTATCAAA AGGATATTGG ATTTATAAAT ACACAGACAT ATCTAAAAAA TGTCTTAGTT AGAAGAATGT TAAGGATGAG CCCTGATTTT ATTATTAATA TTCTGTATAG ATTTAGGGAT TTGTACAAAT AA
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Protein sequence | MEDDKVKLSV LMSVYEKEDP IYFSDSLRSL SSQTRMADNV VIVEDGRIND ELSDIINAYR AKLNITSVKL KLNRGLAEAL NEGLKYCDSE YVARMDSDDI SHKTRFERQI EFMEKNNDVS VCGAYIEEIT GAGRKISVRT VPLTHNEICR FAKTRSPMSH PVVMFRKNDV LNVGGYRLFR KSQDMALWSL MIMRGYRFAN IGEPLLKMRI CGDIKKKRGL SYYKEEVKVL KYQKDIGFIN TQTYLKNVLV RRMLRMSPDF IINILYRFRD LYK
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