Gene Cphamn1_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1911 
Symbol 
ID6375603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2075981 
End bp2077048 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content48% 
IMG OID642684407 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_001960308 
Protein GI189500838 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0259449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATTT TGATTACCGG AGGGGCGGGG TTTATCGGGT CGCATGTGGT GCGGCATTTC 
GTCGATACCT ATCCTCAGTA TACCATCACC AACCTCGACA AGTTGACCTA TGCGGGTAAT
CTGGAGAATC TGCGGGATGT AGAGGATCGT TCGAATTACC GGTTTGTCAA GGGAGATATA
ACCGATGGTG ATGCTATGAT CATACTGTTC GCACAGGAGC GTTTCGATGG GGTAATCCAC
CTCGCTGCCG AGTCGCATGT GGATCGTTCG ATTGCGAACC CGACCGAATT TGTGGTGACC
AATGTGTTGG GTACGGTGAA TCTTCTGAAT GCTTCACGAG CTTTGTGGAA AGATGATTTT
GGAGGGAAAC GCTTCTACCA TGTCTCAACC GATGAGGTCT ATGGCGCATT GGGTGGCGAA
GGTATGTTTA CCGAAGAGAC CTCTTACGAT CCGCACAGTC CCTACTCTGC TTCGAAAGCA
TCGTCCGATC ACTTCGTTCG GGCATATCAC GACACCTATG GATTACCGGT GGTGATCAGC
AACTGCTCGA ATAACTATGG CTCGTTCCAG TTTCCCGAGA AACTCATTCC GCTTTTTATC
AATAATATTT GCAACAACAA GCCGTTGCCG GTCTATGGAA AAGGCGAAAA TATACGCGAC
TGGCTTTGGG TTGTTGATCA TGCGAGTGCG ATCGACGCGA TCTATCACAA GGGAAAGCAG
GGGGAGACCT ACAATATCGG GGGAAATAAT GAGTGGACAA ATATTGCACT TATCCGATTG
CTCTGTAGCA TTATGGATCG GAAACTGGGA CGTTCTGAGG GAGAATCCGA GAAATTGATA
ACCTATGTGA CTGACAGAGC TGGTCATGAT TTCCGATACG CCATAGATTC CTCGAAACTC
CAGAGGGAAT TGGGATGGAC TCCTTCTTTA CAGTTTGAAG AGGGATTGGA AAAAACTGTT
GACTGGTATC TCCAGAACGG CGAGTGGCTC GAAAATGTCA CATCAGGTGC GTATCAGCAG
TATTATGAGG AGATGTACGA GAAAGGGGAA ATGAATAATG ACGATTGA
 
Protein sequence
MHILITGGAG FIGSHVVRHF VDTYPQYTIT NLDKLTYAGN LENLRDVEDR SNYRFVKGDI 
TDGDAMIILF AQERFDGVIH LAAESHVDRS IANPTEFVVT NVLGTVNLLN ASRALWKDDF
GGKRFYHVST DEVYGALGGE GMFTEETSYD PHSPYSASKA SSDHFVRAYH DTYGLPVVIS
NCSNNYGSFQ FPEKLIPLFI NNICNNKPLP VYGKGENIRD WLWVVDHASA IDAIYHKGKQ
GETYNIGGNN EWTNIALIRL LCSIMDRKLG RSEGESEKLI TYVTDRAGHD FRYAIDSSKL
QRELGWTPSL QFEEGLEKTV DWYLQNGEWL ENVTSGAYQQ YYEEMYEKGE MNNDD