Gene Cphamn1_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1904 
Symbol 
ID6375596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2071375 
End bp2071764 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content42% 
IMG OID642684401 
ProductPilT protein domain protein 
Protein accessionYP_001960302 
Protein GI189500832 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.101114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGTA GATATCTTCT GGACACCAAC ATTGTCATTG ATCTCTTTGC CGAGGAGCAG 
AATGTTATAG CTTTTCTTGA GGAAGCTCAA GAAGTCTTTT TACCGGTGAT TGTATTGGGA
GAGATGTATT TTGGGGCACT CAGATCACAG AGGGTTAAGG AGAATATACA TCGACTCACT
GCTTTTGCTG AGCAAAGTGT TGTGTTGGAT TGTGATGCGA AGGTTGCTCG TCGTTATGGT
GAAGTAAAAA ATATGCTTCG GAAAAGAGGG CGACCGATCC CGGAGAACGA TATATGGATT
GCTGCAATAG CCCTTGAGAA TAATTTGACT CTTGTATCAC GAGATGATCA TTTCTTGGAA
GTGGATGGGT TGAAACTCAA AGCATGTTGA
 
Protein sequence
MSGRYLLDTN IVIDLFAEEQ NVIAFLEEAQ EVFLPVIVLG EMYFGALRSQ RVKENIHRLT 
AFAEQSVVLD CDAKVARRYG EVKNMLRKRG RPIPENDIWI AAIALENNLT LVSRDDHFLE
VDGLKLKAC