Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1904 |
Symbol | |
ID | 6375596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2071375 |
End bp | 2071764 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642684401 |
Product | PilT protein domain protein |
Protein accession | YP_001960302 |
Protein GI | 189500832 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.101114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGTA GATATCTTCT GGACACCAAC ATTGTCATTG ATCTCTTTGC CGAGGAGCAG AATGTTATAG CTTTTCTTGA GGAAGCTCAA GAAGTCTTTT TACCGGTGAT TGTATTGGGA GAGATGTATT TTGGGGCACT CAGATCACAG AGGGTTAAGG AGAATATACA TCGACTCACT GCTTTTGCTG AGCAAAGTGT TGTGTTGGAT TGTGATGCGA AGGTTGCTCG TCGTTATGGT GAAGTAAAAA ATATGCTTCG GAAAAGAGGG CGACCGATCC CGGAGAACGA TATATGGATT GCTGCAATAG CCCTTGAGAA TAATTTGACT CTTGTATCAC GAGATGATCA TTTCTTGGAA GTGGATGGGT TGAAACTCAA AGCATGTTGA
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Protein sequence | MSGRYLLDTN IVIDLFAEEQ NVIAFLEEAQ EVFLPVIVLG EMYFGALRSQ RVKENIHRLT AFAEQSVVLD CDAKVARRYG EVKNMLRKRG RPIPENDIWI AAIALENNLT LVSRDDHFLE VDGLKLKAC
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