| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1877 |
|---|
| Symbol | purH |
|---|
| ID | 6375568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2037180 |
|---|
| End bp | 2038757 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642684373 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_001960275 |
|---|
| Protein GI | 189500805 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0128464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATC CTGTTATCAA GCGTGCATTA GTGTCAGTTT CTGATAAATC CGGCGTTGTT
GAATTCTGCC GCGAACTCTC ATCCATGGGG GTTGAAATCT TCTCGACCGG AGGAACTCTG
CGGAAACTTC AGGAATCCGG TGTTGCAGCG GCTTCCATTT CAACCATTAC GGGCTTTCCG
GAAATTATGG ATGGTCGGGT GAAAACGCTG CATCCGAAAA TCCATGGCGG ACTGCTTGCT
GTGCGTGATA ATGCCGATCA TATCGCTCAG GCGCGGGATA ACGGTATCGG TTTTATCGAC
ATGGTTGTCG TCAATCTCTA TCCGTTCCAG GAGACAGTCG CGAAACCTGA TGTGACGTTT
GAAGAGGCGA TTGAAAATAT CGATATCGGC GGACCTTCGA TGCTTCGCAG CGCGGCAAAG
AACCATGAGT CGGTGACCGT TATCACTGAA AGCGCCGATT ACCGGACGGT ACTCGATGAA
ATGCGGGAGA ACAACGGCGC GACCACACGT TCGACCCGAC TGAAGCTGGC AGGAAAAGTG
TTTACACTGA CATCCCGTTA CGACCGGGCA ATCGCGGATT ACCTGGCTGC ATCTTCAGAG
GGAGAGGCAT CTTCGGAAGC TGGATCGATC AGTGTCCGGC TGGAAAAAGA GATCGATATG
CGCTATGGTG AGAACCCGCA TCAGAACGCC GGTTTCTATC GTATGGACGA CGGCAGCGGG
TCACGCTCGT TTGAGGAGTA TTTCCGGAAA CTTCACGGTA AGGATCTTTC ATACAACAAC
ATGCTCGATA CTGCCGCGGC GACCGCTCTG ATTGAAGAGT TCAGGGATGA AGCGCCGGCG
GTGGTTATTA TCAAACATAC CAATCCTTGC GGTGTCGCGC AGGCCGATAC GCTTGTCGAG
GCCTATCGCA AGGCGTTCTC AACCGATACA CAGTCTCCTT TCGGCGGGAT CATCGCATGC
AACAGACCGC TCGATATGGA AACCGCGAAG GCCATTGATG AAATCTTCAC CGAAATCCTT
ATTGCTCCGG CCTATGAAGA AGGGGTTCTT GATATGCTGA TGAAGAAGAA GAACCGGCGT
CTTCTTCTCC AGAGAAAACC TCTTCTGCAG GAGGTTACGG AATACAAGTC AACCCGGTTC
GGCATGCTGG TACAGGAAAG AGACAGCCGG ATTGCTTCCC GGGATGACCT GAAAGTCGTC
ACGAAACGTC AGCCTTCAGC GCAGGAGCTC GATGATCTCA TGTTTGCATG GAAGATCTGC
AAGCATGTGA AGTCAAACAC GATCGTCTAT GTGAAGAACC GACAGACAGT CGGGGTTGGA
GCAGGACAGA TGTCCCGTGT CGATTCAGCG AAAATCGCCC GTTCAAAAGC TGCCGAGGCG
GGCCTTGACC TGAACGGATC CGCGGTCGCG TCAGACGCGT TTTTCCCGTT TGCCGACGGA
CTGCTCGCAG CGGCAGAAGC GGGAGCTATG GCGGTTATAC AGCCCGGCGG ATCGGTTCGC
GATGATGAGG TTATCGCCGC CGCCGACGAG CATGACCTCG CGATGGTGTT CACCTCTATG
CGGCACTTCA AGCATTGA
|
|---|
| Protein sequence | MSDPVIKRAL VSVSDKSGVV EFCRELSSMG VEIFSTGGTL RKLQESGVAA ASISTITGFP
EIMDGRVKTL HPKIHGGLLA VRDNADHIAQ ARDNGIGFID MVVVNLYPFQ ETVAKPDVTF
EEAIENIDIG GPSMLRSAAK NHESVTVITE SADYRTVLDE MRENNGATTR STRLKLAGKV
FTLTSRYDRA IADYLAASSE GEASSEAGSI SVRLEKEIDM RYGENPHQNA GFYRMDDGSG
SRSFEEYFRK LHGKDLSYNN MLDTAAATAL IEEFRDEAPA VVIIKHTNPC GVAQADTLVE
AYRKAFSTDT QSPFGGIIAC NRPLDMETAK AIDEIFTEIL IAPAYEEGVL DMLMKKKNRR
LLLQRKPLLQ EVTEYKSTRF GMLVQERDSR IASRDDLKVV TKRQPSAQEL DDLMFAWKIC
KHVKSNTIVY VKNRQTVGVG AGQMSRVDSA KIARSKAAEA GLDLNGSAVA SDAFFPFADG
LLAAAEAGAM AVIQPGGSVR DDEVIAAADE HDLAMVFTSM RHFKH
|
|---|
| |