| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1875 |
|---|
| Symbol | |
|---|
| ID | 6375566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2033054 |
|---|
| End bp | 2034973 |
|---|
| Gene Length | 1920 bp |
|---|
| Protein Length | 639 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642684371 |
|---|
| Product | Rieske (2Fe-2S) domain protein |
|---|
| Protein accession | YP_001960273 |
|---|
| Protein GI | 189500803 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3349] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0135993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCA GAGAGTTTCT CGGGAAATTT TTCAAAAGAA GCGGCATCGC CGGCGGTATC
GCGGCAGTCG GTGCTGCCGG TGCACTCGGC TATTACCAGC CACGCAAAGA GATATACAGC
GAGGGAGAGG AGGACGCCGA CGGGTTGAAA GAGCGGCTTG AGGAGCCCGG AAAGGCTGTT
GTGGTCGGTG GTGGTCTTGC AGGGATCAGC GCCGCGATGG AACTTGCCCG CAGGAATTTT
GAGGTTACTC TTGTCGAAGC TTCAGCAGAG CCTGGTGGAA AGCTGACCGG CTGGGAGGTT
GACGCTCTGG GGACGCGGTT TCCGGTGGAA CACGGTTTTC ACGGATACTT CAACCAGTAC
TATAACCTCA ACGAGATGTT TGCCGAGTCG GGGGTCGGTG ACGTTTTCAT GCCCGCTCCG
GGTTATCCGG TGCTGTTCAG GGAGCAGCCG CTTGAAGTGT TCGGTAATAC CCCGAAATTG
TTTCCCTTTA ACCTGTTTTC GGTATTGCAG CAGTCGTCGT CGCTCGACGT TATTCCCATA
ATGAAGGATT TCAGGCAGAT GCTGCCTGTC CTGGATATGT TTCGCTATGA GTATGACCGT
ACCTTTGAGC GGTATGACGG TGTTGATTTT CTGACATTCT GTAGGGAGCA GGAGATCTAT
GAACCGTTTT TAAGAACGGT CTTGCATCCT TTTTCCGACG CGACCATGAA CAGGATGGAG
GTGCTTTCAG CGGCTGAGGC GATCCGGTAT TTTCATTTCT ACTTCATGGG GAGTCCCGAG
GCGTTAGGTT ACCGGATTAC AACCAGGAAC TGTATGGATG CCTTGATCCG TCCTATGGAA
CGGCGGCTGA AAGAGCTTGG AGTCAGGATG CTCCTGGGAA AGAAGGTCAG CCGGATTGTC
GTTGACGGTC AGTCTGTTTC CGGTGTCGAA CTGGACGGCG GCGGTTCGGG TGGGCTTGTC
GTGAGGGTTG ATGCCGCCGC GGTCAGAGAG GGTGAGTGGG CGTCGTTTAA AGGGGGTAAC
GGCATGCCGG TGCTTCTGAC CAGGCGTGAC GGGGAGTATA TCGCTTTTGA CGCTACCTGT
ACGCATATGG GATGTCCGGT TGTTCCTGAT GAAAAATCCG AAGGTTTTTT CTGCCCCTGT
CATGCCGGGA TGTTTGACGG AAACGGGGCT GTAGTAAGCG GGCCTCCTGA AACGCCTCTG
GGAAAACTTG ACGTGACGGT TGCCGGTCAG GAACTGCTGG TGTTTTCCGG AACCACGGGC
GGCAAAGAGG TTCTGGAATG TGATTACTGC GTGATGGCCG CGGACGTTTC CGGCACCAAG
AGGATTGTCG AACGTTCAGC GATGCGGCAG CCGGAGTTTG AATCGCAGAT CGCGGCCCTT
GGAACAGCAG ATCCCTATGT TGTCTGGAGG CTCTGGCTGG ACAAACCGCT CACATCCGCG
GAGTATCCGT TCTATACGGT CGCGGGGTAT ACCTATACGG ATTCGATCTC TCTGTTTTCG
AGGTTTCAGG AGCCTTTTAT TTCCTGGTCA AAGCAACAGG GGGGCAGCGT TGTGGAACTG
CATGCCTATG CTATCGCTCC CGGTGATATG CGTTCTGACG AGGTGATCAA ACAGACGATG
TTGAGGGAGA TGCATCACAT GTTTCCGGAA ACCAGGGATG CCCGGATTCT CTATGACGTC
TACATGCAGC AGCAGAACTT TACGCGCTGG GCACCGGGAG ATCATGCCGG AAGACCGGTT
TCCGAGACGC CGCTGGATAA TCTTTTTCTC GCCGGAGACT GGGTGAAAGT CGATGCGCCG
GTTTTTCTCA TGGAAGCAGC CGCTTTCACC GGCCGCCTCG CGGCAAACGC AATCTGTCGC
AAAGAGGGCT TGAAACCGAC ACCTCTGCCG ATCGTACCCA TGGACGGGTT GTTTGCGTGA
|
|---|
| Protein sequence | MDRREFLGKF FKRSGIAGGI AAVGAAGALG YYQPRKEIYS EGEEDADGLK ERLEEPGKAV
VVGGGLAGIS AAMELARRNF EVTLVEASAE PGGKLTGWEV DALGTRFPVE HGFHGYFNQY
YNLNEMFAES GVGDVFMPAP GYPVLFREQP LEVFGNTPKL FPFNLFSVLQ QSSSLDVIPI
MKDFRQMLPV LDMFRYEYDR TFERYDGVDF LTFCREQEIY EPFLRTVLHP FSDATMNRME
VLSAAEAIRY FHFYFMGSPE ALGYRITTRN CMDALIRPME RRLKELGVRM LLGKKVSRIV
VDGQSVSGVE LDGGGSGGLV VRVDAAAVRE GEWASFKGGN GMPVLLTRRD GEYIAFDATC
THMGCPVVPD EKSEGFFCPC HAGMFDGNGA VVSGPPETPL GKLDVTVAGQ ELLVFSGTTG
GKEVLECDYC VMAADVSGTK RIVERSAMRQ PEFESQIAAL GTADPYVVWR LWLDKPLTSA
EYPFYTVAGY TYTDSISLFS RFQEPFISWS KQQGGSVVEL HAYAIAPGDM RSDEVIKQTM
LREMHHMFPE TRDARILYDV YMQQQNFTRW APGDHAGRPV SETPLDNLFL AGDWVKVDAP
VFLMEAAAFT GRLAANAICR KEGLKPTPLP IVPMDGLFA
|
|---|
| |