| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1870 |
|---|
| Symbol | |
|---|
| ID | 6375561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 2027386 |
|---|
| End bp | 2028246 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642684366 |
|---|
| Product | PHP domain protein |
|---|
| Protein accession | YP_001960268 |
|---|
| Protein GI | 189500798 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0116618 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATACA GCTTGTCAGG TGTAGGGCAT AATGGCTTTG GAAAAGCAGA TTTACATATA
CACACTAAAT GTTCAGACGG AGTCTTTACA CCGGAAGAAA TTGTAGAAAA AGCAAAAAAA
ACCGGATTGA AGGCTATAAG TATAACTGAC CATGATTCTG TTTTAGGAAT TGACGAAGCA
AAGCCATTAG CCATAGAATA CGGCATAGAG CTTATTACCG GTGTAGAAAT GAGCTCTACC
TATCAGGGAC ATGATATTCA TATCCTTGGT TATTTTTTTG ATCATAAAAA CCCGGAACTC
AAGAGTTATC TGGAGCTTTG TAAGCAGTTG CGTACCGAGC GCGCGGAGCG TATGGTAGGA
AAGCTTGCAA AAATCGGTGT AAAAATCGAG ATTGAACAGA TTATTCTGAA AGCACAGAAC
GGCAGCGTTG GACGGCCTCA TATTGCCGCT GTGCTGCAGG ACGGGGGGTT TGTGAGAAGT
TTCAGTGAAG CGTTCAGCAA GTATCTCGGC TCGCACAGTC CTGCCTATGT AAAAAGTATT
GAAACACCCC CCGCTGAAAT CATCAAGCTC ATTAACAAAG CCTCCGGGCT ATCGTTTCTT
GCACATCCCG GTCAGAACAT ACCGGATGAG ATTCTCCGGA AATTGATCAA TTTCGGCCTT
GACGGCATTG AAATAATCCA TCCTTCCCAC GACTCCTACA AAATGAACTA CTACAGGGAA
ATCGCCAATG AGTATTTCAT GCTTTTTTCA GGTGGCTCTG ATTACCACGG CCTCAAGGAT
CAGGAAGAAG ATCACTTCGG CCAGACGACG ATACCCTATG AATGGGTCAC AAAAATGAAA
AGCAGGATAG TTACGGCTTA G
|
|---|
| Protein sequence | MPYSLSGVGH NGFGKADLHI HTKCSDGVFT PEEIVEKAKK TGLKAISITD HDSVLGIDEA
KPLAIEYGIE LITGVEMSST YQGHDIHILG YFFDHKNPEL KSYLELCKQL RTERAERMVG
KLAKIGVKIE IEQIILKAQN GSVGRPHIAA VLQDGGFVRS FSEAFSKYLG SHSPAYVKSI
ETPPAEIIKL INKASGLSFL AHPGQNIPDE ILRKLINFGL DGIEIIHPSH DSYKMNYYRE
IANEYFMLFS GGSDYHGLKD QEEDHFGQTT IPYEWVTKMK SRIVTA
|
|---|
| |