Gene Cphamn1_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1821 
Symbol 
ID6375512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1974688 
End bp1975830 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content52% 
IMG OID642684318 
Productglycosyl transferase group 1 
Protein accessionYP_001960220 
Protein GI189500750 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.500985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG GCATTTCCTG CCATCACACC TACGGCGGAA GCGGAGCGGT GGCTACCGAA 
CTGGGTAAGG CCCTGGCAGA ACGTGGGCAT ATCATTCATT TTATCAATCG TTCTGCGCCT
TTCAGGCTGG GCGGATTCAC GAAGAACATC TTTTATCACG AAGTTGAGGC GATGCATTAC
CCGGTGTTCG AGTGCCCGTT TTATTCGCTT GCCCTCGCGA CAAAAATCGC CGAGGTGGCA
ACCTACGAAA AGCTGGACGT GGTGCACGCA CATTACGCGA TTCCTCATGC GCTGAGCGCC
ATGCTTGCCC GTCAGATGCT TGAAGATTCC TGTTCAGAGG CGAAATGTTT CAAACTGGCG
ACGACACTGC ATGGTACCGA TATTACTGTT GTCGGCGCTG ACAACAGTAT GCATGGCGCT
GTAAGGCTGG CTATCAACAA GTCAGACGGG GTGACAACTG TGTCGGAATA TCTGAAAAGG
GAAACCGTGA GGCTTTTCAG CCCTAATCAT GAAATCGAAG TGATTCCGAA TTTTGTCGAC
ACTGAACTGT TTCATCGTCA GTCGAATAGT GCGGAAATCC GTGAACAGCT CGGGCTCGAT
GGTGAAAAGG TCTGTATTCA CATATCCAAC TTCAGGCCGG TCAAGCGGAT CCGTGATGTC
CTGAAAACCT TTTACACTGT TGTGAAGAAG ATCCCGGCGA CATTATTGCT TGTCGGGGAC
GGTCCGGAAA GAAGCGAGGC TGAAGTATGG GCACGGGAGA ACGGTATTGA ACGGCATGTG
CGGTTTCTCG GAAAGATAGA TGATATTGTT CCCCTGCTTT CGGTTTCAGA TCTGATGCTG
ATGCCGAGTA GTGGAGAGTC TTTCGGACTG GCAGCTCTTG AAGCTATGGC CTGTGGTGTA
CCGGTTATCG TAACCGATAC GGGCGGCTTT CCTGAGTTCA TTTCGAACGG CAGGCACGGT
TATCTCGTCG AGCTTGGCAA TGTCGGGCGG ATGTCTGAAA AGGCGCTGGA GCTGTTGACT
GATACCGGGC GATGGGAAGC GTTTTCCCGA AACTGCGTCG AACAGGCCCG GAACTACCAT
GTTTCAACGC TGGTTGAGCG CTATGAGGCG TTTTACTCAA GCCTGTTGGA GGAAAAGCGC
TAA
 
Protein sequence
MKIGISCHHT YGGSGAVATE LGKALAERGH IIHFINRSAP FRLGGFTKNI FYHEVEAMHY 
PVFECPFYSL ALATKIAEVA TYEKLDVVHA HYAIPHALSA MLARQMLEDS CSEAKCFKLA
TTLHGTDITV VGADNSMHGA VRLAINKSDG VTTVSEYLKR ETVRLFSPNH EIEVIPNFVD
TELFHRQSNS AEIREQLGLD GEKVCIHISN FRPVKRIRDV LKTFYTVVKK IPATLLLVGD
GPERSEAEVW ARENGIERHV RFLGKIDDIV PLLSVSDLML MPSSGESFGL AALEAMACGV
PVIVTDTGGF PEFISNGRHG YLVELGNVGR MSEKALELLT DTGRWEAFSR NCVEQARNYH
VSTLVERYEA FYSSLLEEKR