Gene Cphamn1_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1809 
Symbol 
ID6375496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1957794 
End bp1958339 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content51% 
IMG OID642684302 
Productpyruvoyl-dependent arginine decarboxylase 
Protein accessionYP_001960208 
Protein GI189500738 
COG category[S] Function unknown 
COG ID[COG1945] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00286] arginine decarboxylase, pyruvoyl-dependent 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCATTTG TACCTGAAAA AGTCTTTTTT ACCAAAGGGG TAGGGCGACA TAAAGAGTAT 
CTCTCATCTT TCGAACTTGC GCTACGGGAT GCCAAGATCG AGAAATGTAA TCTTGTTACC
GTATCGAGCA TTTTTCCTCC CAAATGTGAG CGTTTGAGCG TCGAGGAAGG GCTGAAACGC
CTCTCTCCCG GAGAAATCAC CTTTGCCGTG ATGGCCAGGA ACTCCACAAA CGAGCACAAC
AGACTGATTG CGTCATCGAT AGGCGTCGCG CTTCCTGCCG ACGAATCCCT GTACGGTTAC
CTCTCGGAGC ACCACCCGTA TGGTCAGACT TCTGAACAAT CCGGAGAGTA CGCTGAAGAT
CTTGCCGCGA CAATGCTCGC AACGACTCTC GGCATTGAAT TTGACCCGAA CAAGGACTGG
GATGAACGTG AAGGAATCTA CAAGATGAGC GGCAAGATCA TCAACTCTTT CAATATCACC
CAATCCGCTG AAGGCGAGGA CGGACTCTGG ACAACGGTCA TTGCCTGCGC GGTACTTCTG
CCCTGA
 
Protein sequence
MSFVPEKVFF TKGVGRHKEY LSSFELALRD AKIEKCNLVT VSSIFPPKCE RLSVEEGLKR 
LSPGEITFAV MARNSTNEHN RLIASSIGVA LPADESLYGY LSEHHPYGQT SEQSGEYAED
LAATMLATTL GIEFDPNKDW DEREGIYKMS GKIINSFNIT QSAEGEDGLW TTVIACAVLL
P