Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1798 |
Symbol | |
ID | 6375485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1946570 |
End bp | 1947475 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642684291 |
Product | Pirin domain protein |
Protein accession | YP_001960197 |
Protein GI | 189500727 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.940307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAC CAAGAGCCAT AAAAAAAGTC TTTACGAGCA AGCCTGTCAC AGAAGGTGCA GGAGTGCGAT TGAAACGTGC GTTCGGTTTC AGTCAGGTTC CTCTTTTTGA CCCCTTTCTT CTGCTTGACG ACTTTCGTTC AGACAATCCG GCAGAGTATC TGAAAGGTTT TCCCTGGCAT CCCCACAGAG GCATCGAAAC CATAACCTAT CTTCTGGAAG GCAGTGTCAA ACACCATGAC AGTCTTGGAA ACAAAGGCAC TATCCTTCCC GGTGACGTAC AATGGATGAC CGCCGGCAGG GGCATCATAC ATGAAGAAAT GCCTTCCGGC GACAAGGACG GTAACGTCGC GGGATTTCAG CTATGGGCCA ACCTGCCTGC CTCGGAAAAA ATGATTTCAC CGGGCTACAG AGATATAAAG TCAGACATGA TACCGCTTGT TCACCTGCAA AACGGTGTCA CCGTTCGTGT TATCTGCGGA ACTATCGACG GGACTCCGGG CGCGGTTGAC GGGATAGCGA TTGACCCCGA ATACCTCGAC ATTACGATTC CTGCCGGAGC AAGCTGGAAC CATCCGGTAA AGGAGAATTA TACGGTTATC ATCTATGTGA TCGCAGGCGA AGCATTGTTC AGCAAGGATC AGCGACCGTT TTCTTCTGAC ACCGAAGGCA AGAGCTACTT CGATATGGAA TCCGACCCGA TTATGGACAA TGAAACACTC ATACTTTACA ACACGGAGGG TGACCACATA CTTGTATCGG CGGAAAAGAA ACCGGTGAGA TTCCTGCTCT TTTCCGGCAA ACCACTGCAT GAGCCTGTCG CCTGGCACGG ACCGATAGTC ATGAATACAC GCGATGAACT GCAAAAAGCC TTTGAAGAGT ACCATAACGG CACATTCCTT AGCTGA
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Protein sequence | MEKPRAIKKV FTSKPVTEGA GVRLKRAFGF SQVPLFDPFL LLDDFRSDNP AEYLKGFPWH PHRGIETITY LLEGSVKHHD SLGNKGTILP GDVQWMTAGR GIIHEEMPSG DKDGNVAGFQ LWANLPASEK MISPGYRDIK SDMIPLVHLQ NGVTVRVICG TIDGTPGAVD GIAIDPEYLD ITIPAGASWN HPVKENYTVI IYVIAGEALF SKDQRPFSSD TEGKSYFDME SDPIMDNETL ILYNTEGDHI LVSAEKKPVR FLLFSGKPLH EPVAWHGPIV MNTRDELQKA FEEYHNGTFL S
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