Gene Cphamn1_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1794 
Symbol 
ID6375481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1940814 
End bp1941773 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content49% 
IMG OID642684287 
Producthypothetical protein 
Protein accessionYP_001960193 
Protein GI189500723 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.51439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAACAAA AGAAAACCAG TAACAAAAAA CTTCTCAGGA CAGTCTTTCA GCTCCTCATA 
TCGATCACTG CACTGTACAT AGTCCTGACA AAAACCGATA CCGCAAAGCT TCTGGAAATC
ATCAGCACGG CCAACCCGTT CTACCTGTTT CTTGCATTTG TGGTTTTCAA CATCTCCAAA
ATCCTCAACG CTCTCAGGCT GAACAGATTC TTCAGGGCTA TAGAGCTTCA CCTGAGCGAA
CGATACAATA TCCTGCTCTA CTATGTCGGC ATGTTTTACA ACATGTTCCT TCCGGGAGGT
ATCGGCGGAG ACGGCTACAA AATCTATGTC CTGAAAAAAA ACCACAGCAT GAAGGTGGTC
AATGTCTTCA ACGCGGTATT CTGGGACCGG GTAGCCGGGG TTTTCGCGCT GCTGTTTCTT
ACGGCCCTCT TTCTGCTCCC GAGCTCCTTT GCAGAAATGC ACAAAGCATA TACCCCGGCA
GTTTACGCCG TTCTTGTTCT CTGCTATCCT GTCTCATGGC TGCTCACCAG GATCCTCTAC
AAACAGTTCA GGAGCATTTT CCTCATTACC GCCGTGGAAT CCGTACTTAT TCAGGCGGCT
CAGGCTCTCT CTGCGTGGTT TATCCTTCTC GCGCTCTCCG TACCCTCCAA CCACATCGAT
TACCTCGCGA TCTTCCTCGT CTCAACCGTC GCCACGGTGC TGCCCATAAC CGTTGGAGGA
GCAGGAGCAC GAGAGATAAC CTTCCTCTAC TCTCTCAACT ATCTCGGACT CGATCCGAAC
GCAGGCGTCG CCCTATCACT GATCTTCTTC GCGATAGCAG CGGTATCCGC CCTTATCGGC
ATGTTCCTGC AAAGCAGATC CGGGGAAAAA GAACGTCAAA AGTCACAGGG CAAAAGTCAA
AAAGAGCAGC AAGACAACAT TTCACATACA GCCAGAGAGA TGAACGAAAC AGATCAATAA
 
Protein sequence
MEQKKTSNKK LLRTVFQLLI SITALYIVLT KTDTAKLLEI ISTANPFYLF LAFVVFNISK 
ILNALRLNRF FRAIELHLSE RYNILLYYVG MFYNMFLPGG IGGDGYKIYV LKKNHSMKVV
NVFNAVFWDR VAGVFALLFL TALFLLPSSF AEMHKAYTPA VYAVLVLCYP VSWLLTRILY
KQFRSIFLIT AVESVLIQAA QALSAWFILL ALSVPSNHID YLAIFLVSTV ATVLPITVGG
AGAREITFLY SLNYLGLDPN AGVALSLIFF AIAAVSALIG MFLQSRSGEK ERQKSQGKSQ
KEQQDNISHT AREMNETDQ