Gene Cphamn1_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1788 
Symbol 
ID6375475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1934381 
End bp1934911 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content48% 
IMG OID642684281 
ProductLipocalin family protein 
Protein accessionYP_001960187 
Protein GI189500717 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0188569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGAA AACTGCTTCT GCTCATTGTT CTTCTTTTGG CGGGCTGTAT CAAGGTCCCG 
GAAGGGGTAT CGGTCATCGA TGGTTTTGAA CTCCAGCGCT ATCTGGGGAC CTGGTATGAG
ATCGCTCGCA TCGAGAACTC TTTTGAGAAA AACTTTACCA GTGTTACAGC TACCTATACA
AGTAACAACG ACGGCAGTGT CGATGTTCTG AACAGGGGTT TTGACGCGAA GAAGGGAGAG
TGGAAAGATA CAGCCGGAAA AGCGAAGTTT GTCGGTGAAG AGAACAGGGG AGAGCTGAAA
GTATCTTTTT TCGGCCCGTT CTTCTCAAGT TATAATATTG TCGCTCTGGA TAAAGAGGAG
TATTCCTGGG CGATAGTCTG CGGTTACAAG AAATCCCTTT TCTGGATTCT CAGCCGTAAT
CCTGTCATGG AGCCTGCACT GTATGACGAA CTGGTCCGGA AGGCAGATTC TCTCGGATTT
GATACCGGCA ATCTTGTGGT CAACCAAGCT CTCGATACGG AAGGGCGCTG A
 
Protein sequence
MLRKLLLLIV LLLAGCIKVP EGVSVIDGFE LQRYLGTWYE IARIENSFEK NFTSVTATYT 
SNNDGSVDVL NRGFDAKKGE WKDTAGKAKF VGEENRGELK VSFFGPFFSS YNIVALDKEE
YSWAIVCGYK KSLFWILSRN PVMEPALYDE LVRKADSLGF DTGNLVVNQA LDTEGR