Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1788 |
Symbol | |
ID | 6375475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1934381 |
End bp | 1934911 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642684281 |
Product | Lipocalin family protein |
Protein accession | YP_001960187 |
Protein GI | 189500717 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0188569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAGAA AACTGCTTCT GCTCATTGTT CTTCTTTTGG CGGGCTGTAT CAAGGTCCCG GAAGGGGTAT CGGTCATCGA TGGTTTTGAA CTCCAGCGCT ATCTGGGGAC CTGGTATGAG ATCGCTCGCA TCGAGAACTC TTTTGAGAAA AACTTTACCA GTGTTACAGC TACCTATACA AGTAACAACG ACGGCAGTGT CGATGTTCTG AACAGGGGTT TTGACGCGAA GAAGGGAGAG TGGAAAGATA CAGCCGGAAA AGCGAAGTTT GTCGGTGAAG AGAACAGGGG AGAGCTGAAA GTATCTTTTT TCGGCCCGTT CTTCTCAAGT TATAATATTG TCGCTCTGGA TAAAGAGGAG TATTCCTGGG CGATAGTCTG CGGTTACAAG AAATCCCTTT TCTGGATTCT CAGCCGTAAT CCTGTCATGG AGCCTGCACT GTATGACGAA CTGGTCCGGA AGGCAGATTC TCTCGGATTT GATACCGGCA ATCTTGTGGT CAACCAAGCT CTCGATACGG AAGGGCGCTG A
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Protein sequence | MLRKLLLLIV LLLAGCIKVP EGVSVIDGFE LQRYLGTWYE IARIENSFEK NFTSVTATYT SNNDGSVDVL NRGFDAKKGE WKDTAGKAKF VGEENRGELK VSFFGPFFSS YNIVALDKEE YSWAIVCGYK KSLFWILSRN PVMEPALYDE LVRKADSLGF DTGNLVVNQA LDTEGR
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