| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1786 |
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| Symbol | |
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| ID | 6375473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1930875 |
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| End bp | 1932617 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642684279 |
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| Product | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD |
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| Protein accession | YP_001960185 |
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| Protein GI | 189500715 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.540323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCTG ACCGGCGATT ACTTCAGCTT CTCAGGCAGT ACCCGCTTCC CTTTGTCACG
TCGGTTCTTC TCGCAACTCT CGGAGGCATC ATGCTGATAG GTCAGACCTT TCTCTTGAGC
AGCATAATTG ATGCTCTCTT TCTGAAACGT GCGGCTCTCG ACAATATTCT CAATCTCCTT
CTGCTCTATG GACTGGCAAG TATGCTGCGG GCAGGATTCA ACTGGACAAG CCGCAACGAG
GCTAATCGGG GAACACTGAA AATAAAACAG CAGCTGCATC GTCAGGTACT CAAAAAAATC
TCTTCTCTCG GACCGGTCTA TGCCGGTTCA CAACGGAGCG GCAAGCTCAG TTCGACAATT
CTTAAGGGGA TTGAATCACT CGACCCCTAT TTCAGCCAGT TCATGCCGCA ACTCGCTCTC
TCTATCCTGC TGCCTTTGAC TGTTCTCTTC GCTGTGTTCC CTGTAGACAT GCGCAGCGGC
TTTATTCTGC TTGGAACGGC GCCGCTCATA CCGCTATTCA TGGTACTGAT AGGAAAAGCC
GCTCAAAAAG CGACGCAAAA ACAGTGGGAG ACGCTCAGCA GAATGAGCGG TAATTTTCTC
GACGTTCTTC AGGGAATGAC GACACTCAAG CTTTTCGGGA GAAGCCGGGA AAGGATCCGC
TCGATATCGG AAATAAGTGA GGCGTATCGA CACGCGACCA TGAAGGTACT CAAGGTTGCC
TTTCTTTCGT CGCTCACCCT GGAACTTGTA GGCGCCGTTG GCACCGCGAT CATCGCTGTG
GATATCGGAC TGCGAATCTG GTCGGGCACG ATAGCCTTCC TCCCCGCATT CTTTGTTCTT
CTGCTTATAC CTGACTTCTA CCTTCCTCTT CGTCAGCTCG GCACAAAATT CCATGCCGGC
ATGGAAGGAG TCAGCGCAGC AGACGATATC TACACGCTGC TTGACAAGCC GGAACCGGAT
ACCGTGGAGC CCCCTGCACC ACAGGAATGC GGCAGGTATT CAACAACGCC CATTGTGTTT
AACGCTGTCG GGTTCACCTA TACTGATGAC GATTCCTACG CGCTGAAAAA TGTATGTTGC
GAACTGAAAC CCGGAACGAT AACAGCAATA ACAGGACCGA GCGGTGCGGG TAAAACAACC
TTCATCAACC TGTTGCTCCG CTTCCTCGAA CCCCGTGAAG GCTCAATACT GTTCGGCAAC
ACGAACCTGA AGAACATCAA CCGTGAAACA TGGCTTCAGG GAGTTTCATG GGTACCGCAA
CACCCCTATC TGTTTAACGC GACCCTCAGG GAAAACCTCC TTATAGCGAA ACAGGACGCT
ACGGAAGATC AACTGAAACA CGCCATATCT GAAAGCCGCC TCGAACCCTT TATCAATTCC
CTGCCGCAAG GTCTCGATAC ACCTGTCGGT GAGCAGGGGG CAAGAATAAG CGGAGGTGAA
GCCCAACGTC TTTCTCTTGC CAGAGCGTTT CTTCATGACT CGCCGCTGCT TGTTCTCGAT
GAACCGACAT CACACACGGA TCCTGCTCTC GAACAGGAAC TCCTTGCATC AATGCAGCGA
CTGATCAGAG GAAAAACAGC CGTCCTTATC GCTCACCGCC TGAGTACAGT CAGAAATGCA
GATCAGATTC TGGTGTTCGA CAGCGGCACG ATCGTACAGT CCGGCACACA CCTCTCGCTT
ATGCAAGAGA GTGGTTTTTA CCGCGACGCC ATGCATTCCG ACGAGGAGGT TGCCGTACAA
TGA
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| Protein sequence | MNPDRRLLQL LRQYPLPFVT SVLLATLGGI MLIGQTFLLS SIIDALFLKR AALDNILNLL
LLYGLASMLR AGFNWTSRNE ANRGTLKIKQ QLHRQVLKKI SSLGPVYAGS QRSGKLSSTI
LKGIESLDPY FSQFMPQLAL SILLPLTVLF AVFPVDMRSG FILLGTAPLI PLFMVLIGKA
AQKATQKQWE TLSRMSGNFL DVLQGMTTLK LFGRSRERIR SISEISEAYR HATMKVLKVA
FLSSLTLELV GAVGTAIIAV DIGLRIWSGT IAFLPAFFVL LLIPDFYLPL RQLGTKFHAG
MEGVSAADDI YTLLDKPEPD TVEPPAPQEC GRYSTTPIVF NAVGFTYTDD DSYALKNVCC
ELKPGTITAI TGPSGAGKTT FINLLLRFLE PREGSILFGN TNLKNINRET WLQGVSWVPQ
HPYLFNATLR ENLLIAKQDA TEDQLKHAIS ESRLEPFINS LPQGLDTPVG EQGARISGGE
AQRLSLARAF LHDSPLLVLD EPTSHTDPAL EQELLASMQR LIRGKTAVLI AHRLSTVRNA
DQILVFDSGT IVQSGTHLSL MQESGFYRDA MHSDEEVAVQ
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