| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1783 |
|---|
| Symbol | |
|---|
| ID | 6375470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1928969 |
|---|
| End bp | 1930030 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642684276 |
|---|
| Product | translation initiation factor, aIF-2BI family |
|---|
| Protein accession | YP_001960182 |
|---|
| Protein GI | 189500712 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family |
|---|
| TIGRFAM ID | [TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGACG CAGTTTCCTT TGAAAACAAC ACACTCGGGT ACCTGGACCA GCGGCTGCTG
CCGCTGAAAG AGGAGTATGT CAGAACAACA AGTTATCAAG ACGCTATTGG AGCGATTAAA
ACCCTCGCTG TCAGGGGAGC TCCCCTTATC GGCATCGTTG CAGGGTATAC CGTCATGCTT
GGCCTGAACA GCTTCGATGG TGATAAAGAG GCTTTTCCGG ACTACTTTAA AAAACTTATT
GCCGAGGTTG AAGCGTCCCG ACCGACCGCG GTCAACCTTT TCTTTGCCAC AGCACGCATG
AAAGAGGTTT ATGATACGCA TTACGCATCT TCCTCACTTG AAGAGCTCTT CGGAAAAATG
CTTGTTGCGG CAAGAAAAAT TCATGATGAT GAGATTGCCA ATTGCGACAA CATGGCCCGT
CACGGAGTAG AACTTATCAG ACAGGACTTT GCGGAAATAC TGAAAACAAG AAAACTCAAC
GTCCTTACAC ATTGCAATAC CGGCACACTT GCTACCGGCG GGTCGGGAAC AGCACTGGGC
GTGATCAAAC ATGCCTGGAA CGAAGGACTG ATAGAAAAAG TGATCACGGC TGAAAGTCGC
CCGCTGTTGC AGGGCCTGCG TCTTACCGCA TGGGAGCTTG AACAGGAAAA CATTCCTTTT
CTGTCAATTT CCGACTCCTC TTCCGCATTC CTTATGCAGA AGGGCATGAT CGATTTCGGG
ATCGTCGGTG CAGACAGGAT CGCGGCAAAC GGAGATACCG CCAATAAAAT AGGAACGTTC
GCTCATGCTG TAAGCGCAGA GCGCCACGGA CTGCCCTACT ACATCGCCGC TCCTGTATCA
ACTATTGATA TTTCGATAAG CGATGGCACA CAGATACCGA TCGAAGAACG CGATGCCGAT
GAGCTGAGAA CAATTTTCGG CACCCAGGTT GCCACGCCCT CAACACCTGT TCTCAACTAC
GCGTTTGACG TCACTCCGGC GGAATATATC CGGGGGATAG TCACCGACAA AAAAGCGGTT
GTCGGAAACT ATGTTTCGGA ACTGCAAAAA CTCATCGACT AA
|
|---|
| Protein sequence | MIDAVSFENN TLGYLDQRLL PLKEEYVRTT SYQDAIGAIK TLAVRGAPLI GIVAGYTVML
GLNSFDGDKE AFPDYFKKLI AEVEASRPTA VNLFFATARM KEVYDTHYAS SSLEELFGKM
LVAARKIHDD EIANCDNMAR HGVELIRQDF AEILKTRKLN VLTHCNTGTL ATGGSGTALG
VIKHAWNEGL IEKVITAESR PLLQGLRLTA WELEQENIPF LSISDSSSAF LMQKGMIDFG
IVGADRIAAN GDTANKIGTF AHAVSAERHG LPYYIAAPVS TIDISISDGT QIPIEERDAD
ELRTIFGTQV ATPSTPVLNY AFDVTPAEYI RGIVTDKKAV VGNYVSELQK LID
|
|---|
| |