Gene Cphamn1_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1781 
Symbol 
ID6375468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1926854 
End bp1928071 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content50% 
IMG OID642684274 
Productaminotransferase class I and II 
Protein accessionYP_001960180 
Protein GI189500710 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATACA CACATTCACC TGTCTTTGTT CCTGCGCAAC GAGTCGAAAA ATACAACTAC 
GCAATTCGCA ACATTGTCAG TCACGCGAAA ATGCAGGAGC AACAGGGAAA AGAGGTCACG
TATCTGAACA TAGGAGACCC TGTACTGTAT GGTTTTCAAC CCCCGGAAGA GCTTATCGAG
GCAACTGTTT TAGCTCTCAG AACCGGAAAC AACGGCTATT CACCGTCTTC CGGAAAAAAA
GAGGCTGTAG AAGCGATAGC CGAAGATGCC CGTTGCCGCG GCATCGATAC AACCCCGGAC
AATATAATCG TTACTTCAGG CGCTTCCGAG GCAGCGGACC TCGTCTGTAC CGCAATGCTC
AACCCGGGCG ATGAGGTGCT CTGTCCTTCA CCGGGTTACC CTCTCTACAG CGCGATAATC
GCCAAACTCA ACGCCAGAGA GCTCCCCTAC AAACTCGATC CGGAAAACAG CTGGCTTCCC
GATCCTGAAG ATATTGAAAG AAGGATCACT TCGCGCACAA AAATCCTGGT CGTCATCAAT
CCGAATAACC CGACCGGGGA ACTCTATCCG CTAAACGTGC TCAGGAGCCT CGCAGACATT
GCGCGCAGGC ACCGGCTGTT AATAATTTCG GACGAGGTTT ACCACAAGCT TGTCTACGAA
GAAGTGCACA TACCGCTTGC ATCTCTCGCC GAAGATGATG TCGCGATAAT CACCATTGAC
AGCCTTTCAA AAAACCTTAT GGCACCCGGA TGGAGAATCG GCTGGCTGGC AATAACCAAC
AGCGTTCTCA TTCCCGATGT CCGTCAGGCA TTTATCAAAC TTGCCGACGC GAGACTCTGC
GCTCCGACCG CGCCTCAATT TGCCATAAAA GCAGCGTTGA ATCCGGGTAA AAACTACATA
GAATCGGTTA TGAAAAGGCT CTCTGCCCAA AGGGAGATCA CTGTAAAAAT GCTCAATGCT
CTTCCGGGAA TCAGCTGCAA TAATCCCAAA GGCGCCTTTT ACGTTATGGG ACAAATCCAG
CTTGACAGAT TTCCTTTCCA CACCGATGAA GAGTTCGTCC TGAGGCTGCT GCAGGAAAAA
CAGATCCTTT TCGTTCATGG CTCGGGATTC GGTACAGACC CGTCACAAGG CTATTTCAGA
GCTGTCTATC TCCCCGATGC TTCAACCTTG AACCGGGTCT ACACTGACCT TGGCGATTTC
ATCCGGAAAT TTCAATAA
 
Protein sequence
MPYTHSPVFV PAQRVEKYNY AIRNIVSHAK MQEQQGKEVT YLNIGDPVLY GFQPPEELIE 
ATVLALRTGN NGYSPSSGKK EAVEAIAEDA RCRGIDTTPD NIIVTSGASE AADLVCTAML
NPGDEVLCPS PGYPLYSAII AKLNARELPY KLDPENSWLP DPEDIERRIT SRTKILVVIN
PNNPTGELYP LNVLRSLADI ARRHRLLIIS DEVYHKLVYE EVHIPLASLA EDDVAIITID
SLSKNLMAPG WRIGWLAITN SVLIPDVRQA FIKLADARLC APTAPQFAIK AALNPGKNYI
ESVMKRLSAQ REITVKMLNA LPGISCNNPK GAFYVMGQIQ LDRFPFHTDE EFVLRLLQEK
QILFVHGSGF GTDPSQGYFR AVYLPDASTL NRVYTDLGDF IRKFQ