Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1781 |
Symbol | |
ID | 6375468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1926854 |
End bp | 1928071 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642684274 |
Product | aminotransferase class I and II |
Protein accession | YP_001960180 |
Protein GI | 189500710 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATACA CACATTCACC TGTCTTTGTT CCTGCGCAAC GAGTCGAAAA ATACAACTAC GCAATTCGCA ACATTGTCAG TCACGCGAAA ATGCAGGAGC AACAGGGAAA AGAGGTCACG TATCTGAACA TAGGAGACCC TGTACTGTAT GGTTTTCAAC CCCCGGAAGA GCTTATCGAG GCAACTGTTT TAGCTCTCAG AACCGGAAAC AACGGCTATT CACCGTCTTC CGGAAAAAAA GAGGCTGTAG AAGCGATAGC CGAAGATGCC CGTTGCCGCG GCATCGATAC AACCCCGGAC AATATAATCG TTACTTCAGG CGCTTCCGAG GCAGCGGACC TCGTCTGTAC CGCAATGCTC AACCCGGGCG ATGAGGTGCT CTGTCCTTCA CCGGGTTACC CTCTCTACAG CGCGATAATC GCCAAACTCA ACGCCAGAGA GCTCCCCTAC AAACTCGATC CGGAAAACAG CTGGCTTCCC GATCCTGAAG ATATTGAAAG AAGGATCACT TCGCGCACAA AAATCCTGGT CGTCATCAAT CCGAATAACC CGACCGGGGA ACTCTATCCG CTAAACGTGC TCAGGAGCCT CGCAGACATT GCGCGCAGGC ACCGGCTGTT AATAATTTCG GACGAGGTTT ACCACAAGCT TGTCTACGAA GAAGTGCACA TACCGCTTGC ATCTCTCGCC GAAGATGATG TCGCGATAAT CACCATTGAC AGCCTTTCAA AAAACCTTAT GGCACCCGGA TGGAGAATCG GCTGGCTGGC AATAACCAAC AGCGTTCTCA TTCCCGATGT CCGTCAGGCA TTTATCAAAC TTGCCGACGC GAGACTCTGC GCTCCGACCG CGCCTCAATT TGCCATAAAA GCAGCGTTGA ATCCGGGTAA AAACTACATA GAATCGGTTA TGAAAAGGCT CTCTGCCCAA AGGGAGATCA CTGTAAAAAT GCTCAATGCT CTTCCGGGAA TCAGCTGCAA TAATCCCAAA GGCGCCTTTT ACGTTATGGG ACAAATCCAG CTTGACAGAT TTCCTTTCCA CACCGATGAA GAGTTCGTCC TGAGGCTGCT GCAGGAAAAA CAGATCCTTT TCGTTCATGG CTCGGGATTC GGTACAGACC CGTCACAAGG CTATTTCAGA GCTGTCTATC TCCCCGATGC TTCAACCTTG AACCGGGTCT ACACTGACCT TGGCGATTTC ATCCGGAAAT TTCAATAA
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Protein sequence | MPYTHSPVFV PAQRVEKYNY AIRNIVSHAK MQEQQGKEVT YLNIGDPVLY GFQPPEELIE ATVLALRTGN NGYSPSSGKK EAVEAIAEDA RCRGIDTTPD NIIVTSGASE AADLVCTAML NPGDEVLCPS PGYPLYSAII AKLNARELPY KLDPENSWLP DPEDIERRIT SRTKILVVIN PNNPTGELYP LNVLRSLADI ARRHRLLIIS DEVYHKLVYE EVHIPLASLA EDDVAIITID SLSKNLMAPG WRIGWLAITN SVLIPDVRQA FIKLADARLC APTAPQFAIK AALNPGKNYI ESVMKRLSAQ REITVKMLNA LPGISCNNPK GAFYVMGQIQ LDRFPFHTDE EFVLRLLQEK QILFVHGSGF GTDPSQGYFR AVYLPDASTL NRVYTDLGDF IRKFQ
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