| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1779 |
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| Symbol | |
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| ID | 6375466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1925783 |
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| End bp | 1926472 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642684272 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_001960178 |
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| Protein GI | 189500708 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.840113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGGACA TAGCAATAAA CCTCAAACGG ATCTCTGATG AAATCCGTGC AACCTGTAAC
AGGATCGGAA GGGACCCTGG GGACATAACA TTGATCGCGG TTTCCAAAAC CAAATCATCG
GCACTTGTCA GAGAGGCTTT TGACGCCGGC CAACGGGACC TGGGAGAAAG TTATGTCCAG
GAATTTCTCG AAAAATACAG TTCCGATCAC CTGTCAGGGC TTCCGATACG CTGGCATTTT
ATCGGGCACC TCCAGTCAAA CAAGGTTAAG GATATTGTTG ACAAGACATA CCTGATTCAC
AGTATTGACA AACTCAAAAC CGCTGAAGAG CTTTCGAAAC TTGCCTCACG AAAAAACCTT
ACGGCAGACT ACCTTATAGA GGTCAACACC TCGGGCGAGG CGACAAAATT CGGTCTTTCT
CCCGAGACGC TGCTTCTTGA AACGTCCCGC CTGTTCACGC TCCCGAATAT TCGCCTTAAA
GGTCTCATGA CAATAGCGTC ACCGGACAGA AATAAAGCGA GAAAGGAGTT CCGCTTGCTG
GGTGAACTGC TTGAAAAACT CAGGGAAACA TCGCCTGATC CTTCATCGCT CACAGAACTG
TCGATGGGAA TGAGCCAGGA TTTTGACATT GCCATTGAGG AAGGTGCGAC AATAATCCGC
ATAGGCACAG CTATTTTCGG TTCACGGTAG
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| Protein sequence | MPDIAINLKR ISDEIRATCN RIGRDPGDIT LIAVSKTKSS ALVREAFDAG QRDLGESYVQ
EFLEKYSSDH LSGLPIRWHF IGHLQSNKVK DIVDKTYLIH SIDKLKTAEE LSKLASRKNL
TADYLIEVNT SGEATKFGLS PETLLLETSR LFTLPNIRLK GLMTIASPDR NKARKEFRLL
GELLEKLRET SPDPSSLTEL SMGMSQDFDI AIEEGATIIR IGTAIFGSR
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