Gene Cphamn1_1777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1777 
Symbol 
ID6375464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1924264 
End bp1924950 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content50% 
IMG OID642684270 
ProductTetratricopeptide domain protein 
Protein accessionYP_001960176 
Protein GI189500706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGT ATCCGCCTGT AGAGACAGAT AAAGAGGCTG AAAAAATAGA CCGTCTGCTT 
GAATTTTTCA TTCTCCACAA AAACCTGATC ATCGCGGTAA CCATAGTGGT AATCGCCATC
GCAGGCTCCC TCGTTTATAT GAAGCAACAA AGCCTGTCGG CAGAAAATAA AGCAAACAGC
CTGGTTTCCT CTGCATCAGC AAGCGCACAG ATCGGAAACT GGCAGCTGGC CATTGACGGT
GACGCTTCTT TCAAAGGACT TCGTGAAATA GTAAAAGAAT ACGGCTCGAC GCCAAGCGGT
AATTTCGCGA AAATCCTGCT CGGAGACAGT TACCTGGCAC TGGGAGAGAT TGATTCCGCC
CTTGAGAGCT ACCGGTCGTA CTCAGGTAAA ATCCCGGATC TCGCCGCTTC GGCACATGCA
GGAGCCGCCC TGTGTCTCTC AAGAAAAAAA GAGTTGCCGG AAGCCGCTCA GCTCTATGAA
AAGGCATCGG AAACAGCAAC CAACCAGGCG TTGAAGGCGC TTTATCTTTC TGACGCCGCT
GACACCTGGC TCTCACTTGG AGAGCTTGAC AAGGCGGTGA CTCGCTATAA AGAAGTCATA
AAAAAGTATC CCGGTCTGGC CGGTGCGGCA AAATCGGAAG AATCCCTGCT CGCTCTCGCG
GGAAAAACAG GGAATATTTC TGAATAA
 
Protein sequence
MEQYPPVETD KEAEKIDRLL EFFILHKNLI IAVTIVVIAI AGSLVYMKQQ SLSAENKANS 
LVSSASASAQ IGNWQLAIDG DASFKGLREI VKEYGSTPSG NFAKILLGDS YLALGEIDSA
LESYRSYSGK IPDLAASAHA GAALCLSRKK ELPEAAQLYE KASETATNQA LKALYLSDAA
DTWLSLGELD KAVTRYKEVI KKYPGLAGAA KSEESLLALA GKTGNISE