Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1777 |
Symbol | |
ID | 6375464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1924264 |
End bp | 1924950 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642684270 |
Product | Tetratricopeptide domain protein |
Protein accession | YP_001960176 |
Protein GI | 189500706 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGT ATCCGCCTGT AGAGACAGAT AAAGAGGCTG AAAAAATAGA CCGTCTGCTT GAATTTTTCA TTCTCCACAA AAACCTGATC ATCGCGGTAA CCATAGTGGT AATCGCCATC GCAGGCTCCC TCGTTTATAT GAAGCAACAA AGCCTGTCGG CAGAAAATAA AGCAAACAGC CTGGTTTCCT CTGCATCAGC AAGCGCACAG ATCGGAAACT GGCAGCTGGC CATTGACGGT GACGCTTCTT TCAAAGGACT TCGTGAAATA GTAAAAGAAT ACGGCTCGAC GCCAAGCGGT AATTTCGCGA AAATCCTGCT CGGAGACAGT TACCTGGCAC TGGGAGAGAT TGATTCCGCC CTTGAGAGCT ACCGGTCGTA CTCAGGTAAA ATCCCGGATC TCGCCGCTTC GGCACATGCA GGAGCCGCCC TGTGTCTCTC AAGAAAAAAA GAGTTGCCGG AAGCCGCTCA GCTCTATGAA AAGGCATCGG AAACAGCAAC CAACCAGGCG TTGAAGGCGC TTTATCTTTC TGACGCCGCT GACACCTGGC TCTCACTTGG AGAGCTTGAC AAGGCGGTGA CTCGCTATAA AGAAGTCATA AAAAAGTATC CCGGTCTGGC CGGTGCGGCA AAATCGGAAG AATCCCTGCT CGCTCTCGCG GGAAAAACAG GGAATATTTC TGAATAA
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Protein sequence | MEQYPPVETD KEAEKIDRLL EFFILHKNLI IAVTIVVIAI AGSLVYMKQQ SLSAENKANS LVSSASASAQ IGNWQLAIDG DASFKGLREI VKEYGSTPSG NFAKILLGDS YLALGEIDSA LESYRSYSGK IPDLAASAHA GAALCLSRKK ELPEAAQLYE KASETATNQA LKALYLSDAA DTWLSLGELD KAVTRYKEVI KKYPGLAGAA KSEESLLALA GKTGNISE
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