| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1776 |
|---|
| Symbol | |
|---|
| ID | 6375463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1923109 |
|---|
| End bp | 1923900 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642684269 |
|---|
| Product | hydrolase, TatD family |
|---|
| Protein accession | YP_001960175 |
|---|
| Protein GI | 189500705 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGTAG ACGTCCATTG CCATCTCTCA TTTCCTGAAT TTGACGAAGA TCGCCCGGAA
GTGATCAGGC GCTTACGGGA ACAGAACATC TCTCTGCTCA TTGATCCGGG AACAAATACC
GAGACCAGCA GACGTTCCAT AGAACTCTCG GCACACCATG AGTTCATCTA TGCCACAGTC
GGCCTCCACC CGCACGAAAT CTCAACGGCT TTCTCCCCGG AGACGTTCTC TCTGCTCGAA
GCACTGACTA CAGAACCGAA GGTTGTCGGT ATCGGAGAGA TCGGGCTTGA CTACCACTAT
CCGGGATATG ACGCGAAGAC CCAGCAGGAG GCGTTCAGAA GCATGCTTCG AATCGCGAAA
AAGCATGATC TGCCGGCAGT GGTTCACAGC AGAGATGCAT GGGAGGATAC ACTGCGAATC
CTTAAAGAGG AACAGTCATC CAATCTCAGG GGCATTATGC ACTGTTTTTC GGGCAACATG
GAACATGCTC GACAATGCAT TCTCTCAGGG TTCAAGATTT CCATTCCCGG AACCCTGACC
TATAAAAAAT CATCGCTGCC GGAAGTAGTG GGTGAAGTCG CCATCGGGGA CCTGCTGACA
GAAACAGATG CTCCATACCT TCCACCGGTT CCATTCAGAG GCAAACGAAA CGAACCTTCA
TATGTAAGGA TTGTGACGGA AAAAATCGCG GCAATCAAGG AACTCACAGT CGAGAAGACA
GCGGCAATCA TTAAAAACAA CGTATTTACC CTGTTCCCTA TCCGCCGCCA CTCTCAAACA
TCCATACCCT AA
|
|---|
| Protein sequence | MFVDVHCHLS FPEFDEDRPE VIRRLREQNI SLLIDPGTNT ETSRRSIELS AHHEFIYATV
GLHPHEISTA FSPETFSLLE ALTTEPKVVG IGEIGLDYHY PGYDAKTQQE AFRSMLRIAK
KHDLPAVVHS RDAWEDTLRI LKEEQSSNLR GIMHCFSGNM EHARQCILSG FKISIPGTLT
YKKSSLPEVV GEVAIGDLLT ETDAPYLPPV PFRGKRNEPS YVRIVTEKIA AIKELTVEKT
AAIIKNNVFT LFPIRRHSQT SIP
|
|---|
| |