Gene Cphamn1_1772 details

Gene Information

• Locus tag: Cphamn1_1772
• Symbol: uvrC
• ID: 6375459
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides BS1
• Kingdom: Bacteria
• Replicon accession: NC_010831
• Strand: +
• Start bp: 1918096
• End bp: 1919982
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 642684265
• Product: excinuclease ABC subunit C
• Protein accession: YP_001960171
• Protein GI: 189500701
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.736337
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCAATT TCGCTGACAA TACAAAAAAA CTTGCATCAC TGCCCTCCTC TCCGGGCGTC 
TACCAGTTTA AAAATGCAAG AGGAAACGTC ATCTATGTCG GAAAAGCCAA AAACCTGCGC 
TCACGGGTAC TGTCATATTT TCGAAACCAT TCACAGCTAT CGGGAAAAAC TCTGGTTCTT 
GCGGGTCATA TCGACGATAT CGAGGTAATC CTCACCTCGT CGGAGGTTGA AGCGCTCATC 
CTTGAGAACA ATCTCATAAA GGAGCTCAAG CCACGCTACA ACATCAATCT CAAGGATGAT 
AAAACCTATC CGTATCTGGT TATCACCAAA GAACCTTTCC CCAGGATTTT CCTTACAAGA 
GAGGTGCGAC AGGACGGCTC AACCTATTTC GGTCCCTATA CGGAAACCCG TCAGCTCCGT 
TCTGTGCTTG AACTGATCAG CTCGATATTC CATGTCAGAA GCTGCAGGCT CAAACTGACC 
CCGGAGAACA TCAGGAACAA AAAATTCTCT GTTTGTCTGG ACTATCATAT CCATAAATGT 
AAAGGCCCGT GTGAAGGGTT TCAGTCTGAA GAGGACTATA ACAGGATGGT CTCTGAAATC 
ATCAGATTGC TGAAGGGAAA AACCTCCGAA TTGGTCGGCT CTCTCAGAGA GGAAATGAAA 
CAATGCGCTG CCGAACTGAA ATTCGAACAG GCAGCCGAAC TGAAACTGCA GATTGACGGG 
CTCATGAAAT ATACTGAGCG TCAGAAAGTC GTAACAACTG ATCCGGTCGA CAGGGACGTC 
TTCGGCATAG AGCGAATGGG AGACAATGCA TGCGGAGTGG TGTTCAAAAT ACGAGAAGGC 
AAACTCCTCG GCTCTCAAAG AATGTATTTT TCAAATATGG AAGAGGAACC GACAGCAAAT 
CTCCTGTCCG GATTTCTTAA AAAATATTAT CTGGAAACAC CCGGCCTCAT TCCGCAGGAG 
ATATTCACAC AGGAAGCTCT TCCGGCAGAA GACAAGGCAT CGCTTCTGAA ACTGTTTTCG 
AAGAAACACA AAGAAGAAAA AAAAGGCAGA AAATCAGTCC ATTTCGTAAC GCCTCGTATC 
GGTGAAAAAG CTCGTCTGGT GGATATGTGC AGGGAAAATG CCAGGCATCA TCTCAGTGAG 
TATCTGACAG AAAAGCAGAA ACGCGGTGAG CTGGCTCAGG AAAATCCGGC ACTGACCGCC 
CTGCAGGAAA CACTTCATCT TGACAAAAAA CCCCTGCGAA TAGAATGCTT TGACAATTCA 
CATTTTCAAG GCAGTGATTA CACAAGTTCC ATGGTCTGTT TTGTAAACGG AAAACCAAGA 
AAATCCGAAT ACAAAAAATT CAGGCTGCGC ACCATTGACG GTTCGGACGA CTATGCGGCA 
ATGAGTGAAG CGATCACACG CCGCTACAGC GGAACGCTTT CCAACGAACT GCCGCTTCCT 
GATCTGATAG TGATCGACGG AGGTAAGGGA CAGGTGAACG TCGCCTGGAA AACGCTCTCG 
AAAACAGGCA TCTCAGTGCC GGTTATCGGC CTGGCAAAAC GACTTGAGGA GATATACTTC 
CCTTCAAGCA GAGATCCCTA CAATCTCCCT AAAACATCTC CCGCTCTGAA GCTTCTGCAG 
AGAATTCGTG ACGAGGCCCA CCGCTTCGCT ATCACCTATC ATCGTACGCT CAGAAAGTCT 
CGAACGCTGA CAACCATACT GACAGAAATC CCCGGTATAG GAGAGAAAAG CGCCATGAAA 
CTTCTCAGTC ACTTCGGATC GATCGAACAG ATAGCCAAAG CAGACAGAAA AGAACTCATG 
AAAATCACAG GGCCTCGAAC AGCCGAGGCG ATTGCACTTT TTTTCAGTAA CAGAACGCTT 
TCTGACAATT CCGGCAACCG CGAGTAA 

 

Protein sequence

MPNFADNTKK LASLPSSPGV YQFKNARGNV IYVGKAKNLR SRVLSYFRNH SQLSGKTLVL 
AGHIDDIEVI LTSSEVEALI LENNLIKELK PRYNINLKDD KTYPYLVITK EPFPRIFLTR 
EVRQDGSTYF GPYTETRQLR SVLELISSIF HVRSCRLKLT PENIRNKKFS VCLDYHIHKC 
KGPCEGFQSE EDYNRMVSEI IRLLKGKTSE LVGSLREEMK QCAAELKFEQ AAELKLQIDG 
LMKYTERQKV VTTDPVDRDV FGIERMGDNA CGVVFKIREG KLLGSQRMYF SNMEEEPTAN 
LLSGFLKKYY LETPGLIPQE IFTQEALPAE DKASLLKLFS KKHKEEKKGR KSVHFVTPRI 
GEKARLVDMC RENARHHLSE YLTEKQKRGE LAQENPALTA LQETLHLDKK PLRIECFDNS 
HFQGSDYTSS MVCFVNGKPR KSEYKKFRLR TIDGSDDYAA MSEAITRRYS GTLSNELPLP 
DLIVIDGGKG QVNVAWKTLS KTGISVPVIG LAKRLEEIYF PSSRDPYNLP KTSPALKLLQ 
RIRDEAHRFA ITYHRTLRKS RTLTTILTEI PGIGEKSAMK LLSHFGSIEQ IAKADRKELM 
KITGPRTAEA IALFFSNRTL SDNSGNRE