| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1771 |
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| Symbol | |
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| ID | 6375458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1916182 |
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| End bp | 1917951 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642684264 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_001960170 |
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| Protein GI | 189500700 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.509872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTAC AAGCGTGGAC GTATCTTATT GTCGGTCTGA CCTTCGCGCT CTATATCGGC
ATTGCGATAT GGGCCAGGGC AGGATCCACA AAAGAATTTT ACGTGGCCGG CGCCGGCGTG
CCGCCTCTCG CGAACGGTAT GGCGACCGCT GCTGACTGGA TGTCGGCGGC ATCATTCATT
TCCATGGCTG GACTTATCTC CTTTATGGGC TATGACGGTT CGATTTACCT CATGGGCTGG
ACAGGCGGCT ATGTCCTTCT TGCGCTGCTT CTGGCACCCT ATCTCCGAAA GTTCGGAAAG
TTCACCGTCC CTGATTTTGT CGGTGATCGC TACTACTCCA ACACGGCGCG TACCGTAGCC
GTCATTTGCG CGATTTTCGT CTCCTTTACC TATGTTGCCG GACAGATGCG CGGCGTGGGC
GTTGTCTTTT CCCGGTTCCT TGAAGTACCT ATCAACATCG GCATTCTCAT CGGTATGGGC
ATCGTGTTCT TCTATGCCGT ACTTGGCGGC ATGAAAGGCA TCACCTACAC TCAGGTCGCC
CAGTACTGTG TGCTCATCTT CGCCTATATG GTACCGGCAA TCTTCATCGC CATCCAGATC
ACAGGCACAC CGATTCCACA GCTCGGTTTT GGCGGAGAAG TCCAGGGCGG GGGGTTCCTG
CTTGACAAGC TTGACGGTCT GCATCAGGAA CTCGGATTTG CGGCCTATAC GGATGGCAGC
AAACCGATGA TAGACGTATT CTTTATTACC TTCGCGCTGA TGGTCGGAAC AGCTGGGCTT
CCGCATGTCA TCGTGCGATT CTTTACCGTA CCAAAGGTCA GGGACGCACG TATCTCAGCC
GGCTGGGCAC TTGTTTTCAT CGCGCTTCTC TACACCACAG CACCTGCTGT AGCTGCATTC
GCGCGATACA ACCTTATCAA CACCGTCAGC AACACCCAGT ATGCAGAACT TCCCTCCTGG
TTTAAAACCT GGGAAGGCAC AGGGCTGATT GCCTGGGCCG ACAAAAACGA CGATGGTGCT
GTACAGTATG TAAAAGGTAA TGCCTTTGCC GGCAAACCGG CGTTTACCGG TGAATCAGGA
GCTGAAGGCC AGCGACTCAT CTCCAATGAG CTGACCACGG ACAACGCCAA TGAGCTGTAT
ATCGACAGAG ATATCATGGT GCTGGCAAAT CCCGAAATCG CCAACCTGCC GCCATGGGTG
ATCGCCCTTG TCGCCGCAGG TGGTCTCGCG GCGGCCCTTT CGACCGCGGC CGGTCTCTTG
CTTGTCATCT CAACATCCGT GGCTCATGAC CTGATCAAAA AGCAGTTCAA CCCGGATATC
GACGAGAAAT CCGAGGTTTT GATCGCACGA ATTTCCGTAG CGGCAGCGGT GATGGTCGCA
GGGTACTTCG GCATCAATCC GCCGGGATTC GTGGCTCAGG TTGTGGCCTT CGCGTTCGGT
CTCGCGGCTT CGTCGTTCTT CCCGGTCATC ATCCTGGGTA TTTTCTACAA AAGGATGAAC
AAGGAAGGCG CTATTGCAGG TATGCTTTCA GGCATCATCT TTACCGCCGC CTATATTATC
TACTTCAAGT TTGTCAACCC GGCAGCCAAC AATGCGGACA ACTGGCTGTT CGGTATCTCA
CCTGAAGGAA TCGGCACGGT AGGTATGATC CTCAACTTTG TTGTGAGCTT CATCGTAGCA
AAGATCACAC CGGCACCTCC GGAGGATATC CAGGAAATGG TTGACAGCCT GAGATACCCT
AAAGGATCCG GGGAAGCATC AATGCACTGA
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| Protein sequence | MDVQAWTYLI VGLTFALYIG IAIWARAGST KEFYVAGAGV PPLANGMATA ADWMSAASFI
SMAGLISFMG YDGSIYLMGW TGGYVLLALL LAPYLRKFGK FTVPDFVGDR YYSNTARTVA
VICAIFVSFT YVAGQMRGVG VVFSRFLEVP INIGILIGMG IVFFYAVLGG MKGITYTQVA
QYCVLIFAYM VPAIFIAIQI TGTPIPQLGF GGEVQGGGFL LDKLDGLHQE LGFAAYTDGS
KPMIDVFFIT FALMVGTAGL PHVIVRFFTV PKVRDARISA GWALVFIALL YTTAPAVAAF
ARYNLINTVS NTQYAELPSW FKTWEGTGLI AWADKNDDGA VQYVKGNAFA GKPAFTGESG
AEGQRLISNE LTTDNANELY IDRDIMVLAN PEIANLPPWV IALVAAGGLA AALSTAAGLL
LVISTSVAHD LIKKQFNPDI DEKSEVLIAR ISVAAAVMVA GYFGINPPGF VAQVVAFAFG
LAASSFFPVI ILGIFYKRMN KEGAIAGMLS GIIFTAAYII YFKFVNPAAN NADNWLFGIS
PEGIGTVGMI LNFVVSFIVA KITPAPPEDI QEMVDSLRYP KGSGEASMH
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