Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1751 |
Symbol | nifH |
ID | 6375438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1893816 |
End bp | 1894640 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642684244 |
Product | nitrogenase reductase |
Protein accession | YP_001960150 |
Protein GI | 189500680 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.555016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAGA TAGCGATCTA TGGAAAAGGC GGGATCGGCA AATCAACCAC AACCCAGAAC ACCGTAGCCG GACTTGCTGA AATGGGAAAA AAGGTCATGG TCGTCGGCTG TGATCCGAAA GCTGATTCGA CGAGGCTTCT GCTCGGCGGA CTCACACAGA AAACTGTACT GGATACACTG CGCGAGGAGG GCGAAGATGT TGAACTTGAA GATATCATCA AAGAGGGGTA CGGCGCTTCA CGTTGTACCG AGTCCGGGGG TCCTGAACCG GGAGTAGGCT GCGCGGGACG CGGGATCATC ACTTCGGTCA ACATGCTGGA ACAGCTCGGA GCATACGATG ATGAATGGGG GCTCGACTAT GTCTTCTACG ATGTGTTGGG TGATGTTGTC TGCGGCGGTT TCGCCATGCC GATACGCGAT GGCAAAGCCG AGGAAATCTA CATCGTGGTT TCCGGTGAAA TGATGGCTAT GTACGCGGCA AACAATATCT GCAAGGGAAT CCTCAAGTAT GCCGATGCAG GCGGTGTTCG CCTGGGCGGT CTGATATGTA ACAGCCGCAA GGTTGATAAT GAAATGGAAA TGATTCAGGA GCTTGCCCGT CAGCTCGGAA CTCAGATGAT CCATTTCGTC CCTCGCGATA ATATGGTTCA GCGTGCGGAA ATCAACAGAA AAACCGTGAT CGATTTCGAC CCGGCGCATC AGCAGGCGGA TGAATACAGA GCGCTTGCCA AAAAAATCGA CGACAATGAG ATGTTCGTCA TTCCTAAACC ACTTGAAATC GAAGAGCTTG AAAAGCTGTT GATCGATTTT GGTATCGCAA ACTAA
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Protein sequence | MRKIAIYGKG GIGKSTTTQN TVAGLAEMGK KVMVVGCDPK ADSTRLLLGG LTQKTVLDTL REEGEDVELE DIIKEGYGAS RCTESGGPEP GVGCAGRGII TSVNMLEQLG AYDDEWGLDY VFYDVLGDVV CGGFAMPIRD GKAEEIYIVV SGEMMAMYAA NNICKGILKY ADAGGVRLGG LICNSRKVDN EMEMIQELAR QLGTQMIHFV PRDNMVQRAE INRKTVIDFD PAHQQADEYR ALAKKIDDNE MFVIPKPLEI EELEKLLIDF GIAN
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