| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1748 |
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| Symbol | |
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| ID | 6375435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1890719 |
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| End bp | 1892347 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642684241 |
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| Product | transcriptional regulator, NifA, Fis Family |
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| Protein accession | YP_001960147 |
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| Protein GI | 189500677 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC CGCTCACTGC GCAAACCAAC ACTATCAGCC TTCTTGCAGA GGTGAGCCGT
GCGCTCAATA ACGAGGAAGA TATCACCATG GTGCTGAGAA ATGTGCTCAG CATCATGTCC
GAGCACATGA ATATCATTCG CGGTGTCATC ACTATCCTCA ACCGTGATAC CACTGAGACG
GTTATCAACG AGTCGTTCGG ACTGACAGAA GAAGAACAGG CCAGAGGAAG ATATATGCCC
GGAGAAGGCA TCATCGGCCA GGTTGTTAAA ACAGGCAAAA GCAGAGTTGT CCCGAGAATT
GACGAAGAGC CCCAGTTTCT TGACCGTACC GGCTCAAGAA ACCGGATCAA TACGGAACAT
CTCTGCTTTG CCTGTGTTCC CATAAAAGCG GGGCGTGAGG TGATCGGTAC GCTAAGCGCC
GACCAGCCTG TCGGCAATGA AGAAAACCCT TCAGAAAAAC CCGGAGAAAC GCAACAGAAT
GAGTCACAGA TAGACGATCT GGTCAGCACG CTCTCCATAA TCGCTTCCAT GATATCCCAG
ACCGTCCGCA TCAAACAGCT TGCCCAGGAA GAGGTTAGGG ATGACCTTAA TGGCCGCTAT
AATGAAAACA AATCTCCGTT TTCATCCTAC AGGAGCGATA CGACAGAACA GGACGAACAG
TACGACAACG CGCACAGGCC CGATAACATC ATCGGCAGTT CAAAAGCCAT GATTGGCGCA
TTCAGAATGA TCGACAAAAT CGCCCCCACC AACGCCACGG CACTTATCCT TGGAGAAAGC
GGAGTCGGCA AGGAACTTGT CGCAAGTGCC ATACATTATA AAAGCCATCG TTCAGAAAAG
CCCTTCATCA AGTTCAACTG CGCCGCATTA CCGGAAAGTA TTATTGAAAG CGAACTTTTC
GGACACGAAA AAGGCTCTTT TACCGGAGCG ACAAACAGCC GGCAGGGACG GTTTGAACTT
GCTGACGGCG GTACCATATT TCTCGATGAA ATTGGCGAAC TCAGTCTGAC CATACAGGCA
AAACTGCTGC GAATTCTGCA GGAAAAAGAG TTTGAACGGG TAGGCGGGTC AAAAACCCTG
AAAACCGATA TGAGGGTCAT TGCCGCCACA AACCGGAACC TCGAAGAGGA GATCGGAAAA
GGTAATTTCA GGGAAGACCT CTATTACCGT CTGAACATTT TTCCGATTAC CGTCCCTCCC
CTGCGCGAAC GGAAAGCAGA TATTCTGCTC CTTGCCGACT ACTTCGTAGA AAAATACAAC
CGTCTGAATT TCAAAGGGGT CAGACGCATA TCGACAAGAG CCATTGACCT TTTTATGCGC
TACCACTGGC CGGGCAACGT CAGAGAACTG GAAAACTGCA TCGAACGGGC GGTAATCCTC
AGTGAAGACA ACGTCATTCA CGGTTATCAT CTGCCGCCCA CACTGCAAAC GGCGGAATCC
AGCGGAACCC CCGCTACCGG ATCCCTGCAG CAACGTCTCG ACGCCATGGA GCACGAAATG
ATCATCGAGG CGCTGAAACG CACAAAGGGA AACATGGCAA AAGCCTCGGC ACAACTCGGC
CTGACGGAAA GAATCATGGG ATTGAGGGTC AGGAAATTCG GTATCGACTA CAGGAAGTAC
CGGCCGTGA
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| Protein sequence | MKKPLTAQTN TISLLAEVSR ALNNEEDITM VLRNVLSIMS EHMNIIRGVI TILNRDTTET
VINESFGLTE EEQARGRYMP GEGIIGQVVK TGKSRVVPRI DEEPQFLDRT GSRNRINTEH
LCFACVPIKA GREVIGTLSA DQPVGNEENP SEKPGETQQN ESQIDDLVST LSIIASMISQ
TVRIKQLAQE EVRDDLNGRY NENKSPFSSY RSDTTEQDEQ YDNAHRPDNI IGSSKAMIGA
FRMIDKIAPT NATALILGES GVGKELVASA IHYKSHRSEK PFIKFNCAAL PESIIESELF
GHEKGSFTGA TNSRQGRFEL ADGGTIFLDE IGELSLTIQA KLLRILQEKE FERVGGSKTL
KTDMRVIAAT NRNLEEEIGK GNFREDLYYR LNIFPITVPP LRERKADILL LADYFVEKYN
RLNFKGVRRI STRAIDLFMR YHWPGNVREL ENCIERAVIL SEDNVIHGYH LPPTLQTAES
SGTPATGSLQ QRLDAMEHEM IIEALKRTKG NMAKASAQLG LTERIMGLRV RKFGIDYRKY
RP
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