Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1747 |
Symbol | |
ID | 6375434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1889571 |
End bp | 1890722 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642684240 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_001960146 |
Protein GI | 189500676 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.73975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATTC CTATACGCCC ATGGATCATT GACACAACGC TTCGGGATGG CGAGCAGGCA CCTGGCGTCG TATTCAGTCC TGAAGAGAAA AAAGACATTG CGGCCATGAT TGCCGATATC GGGGCAGACG AACTTGAAAT CGGTTATCCC GCGATAAGCG TTGATGAACA GCGGGTCATC AGGGAAATCG TTGCCATGAA GCTTCCGAAG AGACTCACCT GCTGGTCAAG AGCAAAACGC TCTGACATTG AGTGCGCAAG CCGATGCGAA ACCGAAGGTA TCCATATCAG CTTTCCCATT TCAAATCTCT ATCTGGATTT GATGGGCAAA GACTATCTCT GGGTACGGGA ACAGCTTGAA ATACTGATAC CCGAAGCAAA AAAGCATTTC AGCTTCGTCA GCGCCGGGGC CCAGGATGCC ACGAGAACAG ACGTGACAAC CCTGGAGGCA TTTGCACGGG ATGCCTCCTT ATGCGGAGCA GACAGGGTTC GCATTGCAGA TACAGTCGGA ATAGCAACAC CCCTGACACT CATGCGGCAT ATCGAGCAAC TGAAATCCTC CGTTACCATA CCTCTCGAAT TTCACGCTCA TAACGATCTC GGTATGGCAA CCGCCAACGC TTTCAGCGCG ATAGAAGCAG GCTGCGATGC CGTGAGTGTC TCGGTAAACG GACTTGGAGA ACGGGCAGGC AATGCGGCAC TCGAAGAATT GTCCCTTGCC CTGAAGCTCT CCGGGCGCTA TCGAAACAGT ATCAAAACCG ATCGTTTACA CCGGCTTTGC GAAAAAGTGG CAAAAGCATC GAACAGGATC ATTCAGGATC AGAAACCGGT GACAGGCAGC GCTGTCTTCC AGCATGAATC GGGCATCCAT TGCAACGCGC TGCTTAAAGA CCCGCTTTCC TACCAACCGT TTCTGCCTGG AGATATAGGC AAAGAAGCAT ACGAACTTGT TATCGGAAAA CATTCAGGAA GTGCTTCAAT CCAGCATGCG ATGGAGGCCA ACGGTATCAG TATTGACCGT GAAGAGGCGG GAAAAATGCT CCTGAGCGTC AGGCTCGCCG CAAACAGAAA AAAAAGCGGC CTTTCATCCG CTGAACTGAT GAACATATAC AAAGAATGCC TTGTCAAACC CCAGGACACA TGCAGAAGAT GA
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Protein sequence | MNIPIRPWII DTTLRDGEQA PGVVFSPEEK KDIAAMIADI GADELEIGYP AISVDEQRVI REIVAMKLPK RLTCWSRAKR SDIECASRCE TEGIHISFPI SNLYLDLMGK DYLWVREQLE ILIPEAKKHF SFVSAGAQDA TRTDVTTLEA FARDASLCGA DRVRIADTVG IATPLTLMRH IEQLKSSVTI PLEFHAHNDL GMATANAFSA IEAGCDAVSV SVNGLGERAG NAALEELSLA LKLSGRYRNS IKTDRLHRLC EKVAKASNRI IQDQKPVTGS AVFQHESGIH CNALLKDPLS YQPFLPGDIG KEAYELVIGK HSGSASIQHA MEANGISIDR EEAGKMLLSV RLAANRKKSG LSSAELMNIY KECLVKPQDT CRR
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