Gene Cphamn1_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1728 
Symbol 
ID6375415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1872728 
End bp1873975 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content48% 
IMG OID642684221 
ProductSte24 endopeptidase 
Protein accessionYP_001960127 
Protein GI189500657 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTAT ACGGTATTGT GATACTGGGG ACTCTTTTCG GTACGTTTAT ACTGAAGCTG 
GTTTCGGATG TAATGAACCT CAAGGCTGCC GGGGCGGATC TGCCTTATGA GTTTCAGGAT
GTCTACGACA GGGACGCATA TGAGCAGTCC CAGCGATATC TTCGTCATAC CACGGTGTTT
TCTCTTGTGA CCGCTGCATT TGATCTTGTG GTTCTGCTTG TTTTCTGGTT TTCCGGAGGG
TTTAATTTTC TTGATCTGCT CGTCAGGGGC GCAGGTTTTT CCCCTCTTGT TACCGGTCTT
TTCTATATCG GCGTCCTGCT TTTGCTTCAG GCGCTCATCT CTTTGCCGTT CGGTGTCTAT
CATACCTTTG TTCTTGAGGA AAAATTCGGG TTCAACAAAA CCTCTCCCGT CACGTTCATG
GCTGATAAAG TGAAAGCCGT GTTTCTCGCT CTTCTGCTTG GTACACCTGT ACTTGCCGGA
CTGTTATGGT TTTTCGAGAA TTCCGGTTCA CTTGCCTGGT TATGGGCCTG GGCCGCTGTC
TCGCTTTTCG GTTTTCTGCT TCAGTATATC GCGCCAACAC TCATCATGCC ATTGTTCAAC
AAGTTTACAC CCCTTGAGGA TGGAGAGCTG AAGGGCGCTA TTATGGAGTA TGCGCGCTCG
GTTGATTTTC CTTTGACGGG GATCTATGTC ATTGACGGCT CGAAACGTTC CTCCAAGGCA
AATGCCTTCT TTACCGGTTT TGGAAAGCAG AAGCGTATCG CGCTTTTCGA TACGCTTGTC
GAGAACCACT CCGTTACGGA GATCGTTGCC GTTCTGGCTC ATGAAATAGG CCATTACAGG
AAAAAGCATA TTCTGATCTC GATGTGGCTC AGCGTGGTCA ATATGGGCGT GGTTTTTTTC
CTGCTTTCTG TTTTCATGAA TAATCGGGCT CTTTTCGATG CTTTTTTTAT GGATGAGCTT
TCCGTTTACG CCAGCCTTCT GTTTTTTTCC CTGCTCTATT CTCCTGTTGA ATTCATTCTT
TCTGTTTTTC TCCAGTCCCT CTCGAGACGT CACGAGTTTC AGGCAGATCA TTTCGCGGTA
AGAACCTACA GCGGCGGCTC TACTCTGGCA GAAGCGCTTA AGAAGCTTTC AAGAAAAAAC
CTGTCCAATC TGACACCTCA TCCGCTCTAT GTTTTTCTCA ACTACTCTCA TCCCCCGGTT
CTTCAGCGTA TTGCGCGGAT AAGGCGGTCA GCGCAGGAGG CGGCGTAA
 
Protein sequence
MNLYGIVILG TLFGTFILKL VSDVMNLKAA GADLPYEFQD VYDRDAYEQS QRYLRHTTVF 
SLVTAAFDLV VLLVFWFSGG FNFLDLLVRG AGFSPLVTGL FYIGVLLLLQ ALISLPFGVY
HTFVLEEKFG FNKTSPVTFM ADKVKAVFLA LLLGTPVLAG LLWFFENSGS LAWLWAWAAV
SLFGFLLQYI APTLIMPLFN KFTPLEDGEL KGAIMEYARS VDFPLTGIYV IDGSKRSSKA
NAFFTGFGKQ KRIALFDTLV ENHSVTEIVA VLAHEIGHYR KKHILISMWL SVVNMGVVFF
LLSVFMNNRA LFDAFFMDEL SVYASLLFFS LLYSPVEFIL SVFLQSLSRR HEFQADHFAV
RTYSGGSTLA EALKKLSRKN LSNLTPHPLY VFLNYSHPPV LQRIARIRRS AQEAA