| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1724 |
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| Symbol | |
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| ID | 6375411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1867716 |
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| End bp | 1869329 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642684217 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001960123 |
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| Protein GI | 189500653 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAA GAAACGCCAT CGAACTCTAT GACACAACGC TCAGAGACGG GACTCAGGGG
GAAAAAATAA CCCTTTCCGT TCAGGATAAG CTGCTCATAG CAGAAAAACT CGATGAGTTC
GGTGTCGATT ACATAGAAGG AGGATGGCCC AGCAGTAACC CGAAAGATGA AGAGTTTTTC
AGCCGGGCGC TGCACCTGAA GCTTAAGAAC GCCAAACTCT GCGCGTTTGG CTCAACAGCG
AGAAAACCGG ACAACATCCG GAACGACCCG AACCTCGTCG GCCTCCTGAA ATCGGAAACA
CCGGTCATAA CCATATTCGG TAAAACCTGG AAAGCGCATT CAGAAAGAGG GCTGGGACTG
CAGGATGCTG AAAACGCCGA GCTTATCTAT AAATCAGTCC TCCATCTGAA AAACGAGGGC
CGGGAAGTAC TGTTCGATGC CGAACATTTT TTTGACGGCT ACAAGGATGA CGCCGCATTT
GCCCTGCGCA TGCTTTTATC AGCAGAAGAA GCAGGCGCTG AACGTCTTGT TCTGTGTGAT
ACCAACGGGG GTACGATGCC CCATGAAATT TTCGAGATAG TCAAAACAGT TATCTCCGCG
ACAAGCGTTC CGGTCGGCAT CCACACCCAT AACGACAGTG AACTTGCCGT AGCCAACGCA
CTTTCCGCAT TGCGTGCGGG AGCGATGCAT GTACAGGGCA CCATCAACGG CATCGGGGAA
CGATGCGGCA ACGCGAACCT TATCAGCGTC ATCCCCAACG TCGTGCTGAA ACTCAACGGA
CAGTTTCATC ACAAACTGAA GCTGAGCCAG CTTACATCAC TTTCCAACTA TGTCTATGAA
TTGCTGAACA TTCCACCTGA CAACCGTGCT CCCTTTGTAG GAAAATCGGC ATTCGCCCAT
AAAGGCGGCA TTCACGTCAG CGCGGTCATG AAGGAAAGCG CCCTTTACGA ACACATTGAC
CCTAAAACTG TTGGAAACCG CCAGCGCGTG CTTGTATCGG AACTCGCTGG ACAGAGTAAT
ATCCGTTACA AGGCAAAAGA ACTCGGTATA GCGTTGCCGG AAAACGGAGA GCTCTTCAAG
AGACTCGTAC AGCGCATCAA AAAACTTGAA TATGAAGGCT TCCAGTTCGA TGTCGCCGAA
GCCTCTTTTG AACTGCTGCT TCATGAGGAA CTCGGAGAGT TCAAGCCTTT CTTCGAGATA
CTTGAATCCA AAGTACATAT CGAATCCGGT AAAAACCGGG AACCGGTTGA CCAGGCAATT
CTGAAAATAG AGGTAAACGA CGAAATCGAG ATGACCGCGG CAGACGGCGA CGGGCCGGTC
AACGCTCTGG ACAAAGCATT GCGTAAGGTT CTGCGCGGCT TCTTTCCTTC AATACGCGCC
ATTCGTCTGG TGGACTACAA GGTTCGCGTA CTCGAAGAGA GAAAGGGCAC AAGCGCCAAA
GTACGGGTAC TTATCCAAAC CAGTGACGGC CACACCACAT GGTCAACTGT CGGGGTCTCG
ACGAACATCA TCGATGCGAG TCTTCAGGCA CTGAGCGACA GCCTGAACTA CCACCTGTTC
AACGCACAGG CAGCCCTGTG TGCCCCGACG TCAACCGAAA CGGTAGAGCT CTAA
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| Protein sequence | MKGRNAIELY DTTLRDGTQG EKITLSVQDK LLIAEKLDEF GVDYIEGGWP SSNPKDEEFF
SRALHLKLKN AKLCAFGSTA RKPDNIRNDP NLVGLLKSET PVITIFGKTW KAHSERGLGL
QDAENAELIY KSVLHLKNEG REVLFDAEHF FDGYKDDAAF ALRMLLSAEE AGAERLVLCD
TNGGTMPHEI FEIVKTVISA TSVPVGIHTH NDSELAVANA LSALRAGAMH VQGTINGIGE
RCGNANLISV IPNVVLKLNG QFHHKLKLSQ LTSLSNYVYE LLNIPPDNRA PFVGKSAFAH
KGGIHVSAVM KESALYEHID PKTVGNRQRV LVSELAGQSN IRYKAKELGI ALPENGELFK
RLVQRIKKLE YEGFQFDVAE ASFELLLHEE LGEFKPFFEI LESKVHIESG KNREPVDQAI
LKIEVNDEIE MTAADGDGPV NALDKALRKV LRGFFPSIRA IRLVDYKVRV LEERKGTSAK
VRVLIQTSDG HTTWSTVGVS TNIIDASLQA LSDSLNYHLF NAQAALCAPT STETVEL
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