Gene Cphamn1_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1719 
Symbol 
ID6375406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1862116 
End bp1863108 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content52% 
IMG OID642684212 
Productketol-acid reductoisomerase 
Protein accessionYP_001960118 
Protein GI189500648 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0059] Ketol-acid reductoisomerase 
TIGRFAM ID[TIGR00465] ketol-acid reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.401294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAT ACTATGAGCA GGACGCTGAT CTGAAGTACC TGCAGGGAAA AAACATTGCC 
GTTCTCGGCT TCGGCAGCCA GGGGCACGCT CACGCTCTGA ACCTGAAAGA GAGCGGCCTG
AATGTCTGTG TCGGTCTGAG ACCTGACAGC TCTTCCTGTG AAAAGGCGCG AGAGAACGGT
CTTGAAGTCA ACACGATAGC CGACGCGGTA GCGTGGGCGG ACATCGTTAT GGTACTTCTC
CCTGACCAGT ACCAGAAAAG CATCTATGAG AGTGAAATCA AACCGAACCT GAAAGAAGGA
AACACCCTTG CGTTCGCTCA CGGCTTCAAT ATTCATTACA ACCAGATTGT TCCTCCCGGG
ACGGTCAATG TCATCATGAT TGCGCCGAAA AGCCCCGGCC ATCTCGTACG ACGCACCTAT
ACCCAGGGCA ACGGAGTCCC CTGCCTGATC GCCGTACATC AGGACTATAC AGGCGAAGCC
AGACAGCAGG CTCTGGCATG GGCAAAAGGC CTCGGCGGAA CGAAAGCGGG CGTTATAGAA
ACCACGTTCA AGAACGAGAC GGAAACCGAT CTTTTCGGAG AACAGGCTGT TCTCTGCGGC
GGCTCGGCTG AGCTCATCAA GGCAGGTTTT GAAACCCTTG TCGAGGCAGG TTACCCGGAA
GAACTTGCCT ACTTCGAGTG CATGCATGAG CTGAAACTCA TTGTTGATCT CTACTATGAA
GGCGGGCTTT CCCGCATGAA CTATTCCGTC AGCGACACCG CGGAATACGG CGGCATGACA
CGCGGTCCGA GAGTGATAAC CTCCGATGTG AAAGCTGAAA TGAAAAAAAT ACTTGAAGAG
GTACAGGACG GCCGCTTTGC AAAAGAATTT ATCGACGAAT GCAATGCAGG CTACCCGAAC
ATGAAAAAAC TGCGCGAGTC CAACGCCGAT CATCCGATCG AAAAGGTCGG GGCAAAACTC
CGTGACATGA TGAGCTGGCT TCTGAAAAAA TAA
 
Protein sequence
MNAYYEQDAD LKYLQGKNIA VLGFGSQGHA HALNLKESGL NVCVGLRPDS SSCEKARENG 
LEVNTIADAV AWADIVMVLL PDQYQKSIYE SEIKPNLKEG NTLAFAHGFN IHYNQIVPPG
TVNVIMIAPK SPGHLVRRTY TQGNGVPCLI AVHQDYTGEA RQQALAWAKG LGGTKAGVIE
TTFKNETETD LFGEQAVLCG GSAELIKAGF ETLVEAGYPE ELAYFECMHE LKLIVDLYYE
GGLSRMNYSV SDTAEYGGMT RGPRVITSDV KAEMKKILEE VQDGRFAKEF IDECNAGYPN
MKKLRESNAD HPIEKVGAKL RDMMSWLLKK